Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32565 | 97918;97919;97920 | chr2:178541384;178541383;178541382 | chr2:179406111;179406110;179406109 |
N2AB | 30924 | 92995;92996;92997 | chr2:178541384;178541383;178541382 | chr2:179406111;179406110;179406109 |
N2A | 29997 | 90214;90215;90216 | chr2:178541384;178541383;178541382 | chr2:179406111;179406110;179406109 |
N2B | 23500 | 70723;70724;70725 | chr2:178541384;178541383;178541382 | chr2:179406111;179406110;179406109 |
Novex-1 | 23625 | 71098;71099;71100 | chr2:178541384;178541383;178541382 | chr2:179406111;179406110;179406109 |
Novex-2 | 23692 | 71299;71300;71301 | chr2:178541384;178541383;178541382 | chr2:179406111;179406110;179406109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1232892938 | -1.11 | 0.002 | N | 0.19 | 0.098 | 0.162503812791 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.37E-05 | None | 0 | 0 | 0 |
T/A | rs1232892938 | -1.11 | 0.002 | N | 0.19 | 0.098 | 0.162503812791 | gnomAD-4.0.0 | 6.39939E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.80333E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0923 | likely_benign | 0.0921 | benign | -0.752 | Destabilizing | 0.002 | N | 0.19 | neutral | N | 0.479000481 | None | None | N |
T/C | 0.3453 | ambiguous | 0.3603 | ambiguous | -0.478 | Destabilizing | 0.628 | D | 0.33 | neutral | None | None | None | None | N |
T/D | 0.425 | ambiguous | 0.5009 | ambiguous | 0.356 | Stabilizing | 0.136 | N | 0.313 | neutral | None | None | None | None | N |
T/E | 0.2476 | likely_benign | 0.276 | benign | 0.344 | Stabilizing | 0.136 | N | 0.292 | neutral | None | None | None | None | N |
T/F | 0.1427 | likely_benign | 0.1808 | benign | -1.022 | Destabilizing | 0.072 | N | 0.391 | neutral | None | None | None | None | N |
T/G | 0.2825 | likely_benign | 0.3123 | benign | -0.962 | Destabilizing | 0.136 | N | 0.341 | neutral | None | None | None | None | N |
T/H | 0.2421 | likely_benign | 0.2833 | benign | -1.065 | Destabilizing | 0.628 | D | 0.374 | neutral | None | None | None | None | N |
T/I | 0.0492 | likely_benign | 0.0485 | benign | -0.298 | Destabilizing | None | N | 0.092 | neutral | N | 0.431209321 | None | None | N |
T/K | 0.2029 | likely_benign | 0.2384 | benign | -0.405 | Destabilizing | 0.136 | N | 0.311 | neutral | None | None | None | None | N |
T/L | 0.0508 | likely_benign | 0.0555 | benign | -0.298 | Destabilizing | 0.001 | N | 0.128 | neutral | None | None | None | None | N |
T/M | 0.0571 | likely_benign | 0.0607 | benign | -0.217 | Destabilizing | 0.214 | N | 0.39 | neutral | None | None | None | None | N |
T/N | 0.1365 | likely_benign | 0.1592 | benign | -0.365 | Destabilizing | 0.266 | N | 0.234 | neutral | N | 0.483656939 | None | None | N |
T/P | 0.2756 | likely_benign | 0.3325 | benign | -0.418 | Destabilizing | 0.266 | N | 0.374 | neutral | N | 0.471959865 | None | None | N |
T/Q | 0.1967 | likely_benign | 0.2123 | benign | -0.477 | Destabilizing | 0.628 | D | 0.385 | neutral | None | None | None | None | N |
T/R | 0.1564 | likely_benign | 0.2027 | benign | -0.164 | Destabilizing | 0.136 | N | 0.367 | neutral | None | None | None | None | N |
T/S | 0.1313 | likely_benign | 0.1437 | benign | -0.696 | Destabilizing | 0.047 | N | 0.169 | neutral | N | 0.465532538 | None | None | N |
T/V | 0.0557 | likely_benign | 0.0555 | benign | -0.418 | Destabilizing | None | N | 0.098 | neutral | None | None | None | None | N |
T/W | 0.4279 | ambiguous | 0.5205 | ambiguous | -0.971 | Destabilizing | 0.864 | D | 0.365 | neutral | None | None | None | None | N |
T/Y | 0.2388 | likely_benign | 0.2791 | benign | -0.705 | Destabilizing | 0.136 | N | 0.403 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.