Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC32579994;9995;9996 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471
N2AB32579994;9995;9996 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471
N2A32579994;9995;9996 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471
N2B32119856;9857;9858 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471
Novex-132119856;9857;9858 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471
Novex-232119856;9857;9858 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471
Novex-332579994;9995;9996 chr2:178764746;178764745;178764744chr2:179629473;179629472;179629471

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Ig-23
  • Domain position: 19
  • Structural Position: 29
  • Q(SASA): 0.5037
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs374521620 -0.522 1.0 D 0.757 0.801 0.800107164582 gnomAD-2.1.1 3.59E-05 None None None None N None 0 1.44642E-04 None 0 0 None 0 None 0 2.65E-05 1.63613E-04
R/C rs374521620 -0.522 1.0 D 0.757 0.801 0.800107164582 gnomAD-4.0.0 6.15723E-06 None None None None N None 0 1.11822E-04 None 0 0 None 0 0 1.79865E-06 1.15942E-05 1.6564E-05
R/G None None 1.0 D 0.699 0.846 0.781155158808 gnomAD-4.0.0 6.84137E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99323E-07 0 0
R/H rs535876380 -1.214 1.0 N 0.746 0.672 0.446510307777 gnomAD-2.1.1 3.19E-05 None None None None N None 6.15E-05 8.68E-05 None 0 0 None 0 None 0 3.53E-05 0
R/H rs535876380 -1.214 1.0 N 0.746 0.672 0.446510307777 gnomAD-3.1.2 2.63E-05 None None None None N None 2.41E-05 6.55E-05 0 0 0 None 0 0 1.47E-05 2.07211E-04 0
R/H rs535876380 -1.214 1.0 N 0.746 0.672 0.446510307777 1000 genomes 1.99681E-04 None None None None N None 0 1.4E-03 None None 0 0 None None None 0 None
R/H rs535876380 -1.214 1.0 N 0.746 0.672 0.446510307777 gnomAD-4.0.0 7.06306E-05 None None None None N None 1.3328E-05 6.66511E-05 None 0 0 None 0 0 8.98313E-05 1.09801E-05 3.20061E-05
R/S rs374521620 -0.69 1.0 N 0.729 0.782 None gnomAD-2.1.1 1.99E-05 None None None None N None 0 5.79E-05 None 0 0 None 0 None 0 2.65E-05 0
R/S rs374521620 -0.69 1.0 N 0.729 0.782 None gnomAD-3.1.2 1.97E-05 None None None None N None 0 1.30941E-04 0 0 0 None 0 0 1.47E-05 0 0
R/S rs374521620 -0.69 1.0 N 0.729 0.782 None gnomAD-4.0.0 1.30125E-05 None None None None N None 0 1.0002E-04 None 0 0 None 0 0 1.27121E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.8654 likely_pathogenic 0.9352 pathogenic -0.103 Destabilizing 0.999 D 0.633 neutral None None None None N
R/C 0.468 ambiguous 0.6852 pathogenic -0.244 Destabilizing 1.0 D 0.757 deleterious D 0.614298754 None None N
R/D 0.9653 likely_pathogenic 0.9849 pathogenic -0.024 Destabilizing 1.0 D 0.717 prob.delet. None None None None N
R/E 0.7779 likely_pathogenic 0.8758 pathogenic 0.078 Stabilizing 0.999 D 0.638 neutral None None None None N
R/F 0.91 likely_pathogenic 0.9594 pathogenic -0.152 Destabilizing 1.0 D 0.74 deleterious None None None None N
R/G 0.8364 likely_pathogenic 0.9275 pathogenic -0.356 Destabilizing 1.0 D 0.699 prob.neutral D 0.665218711 None None N
R/H 0.237 likely_benign 0.4263 ambiguous -0.881 Destabilizing 1.0 D 0.746 deleterious N 0.513096016 None None N
R/I 0.7059 likely_pathogenic 0.8096 pathogenic 0.544 Stabilizing 1.0 D 0.743 deleterious None None None None N
R/K 0.2878 likely_benign 0.4045 ambiguous -0.148 Destabilizing 0.998 D 0.519 neutral None None None None N
R/L 0.6494 likely_pathogenic 0.7819 pathogenic 0.544 Stabilizing 1.0 D 0.699 prob.neutral N 0.518441285 None None N
R/M 0.7995 likely_pathogenic 0.8904 pathogenic 0.004 Stabilizing 1.0 D 0.744 deleterious None None None None N
R/N 0.9178 likely_pathogenic 0.9638 pathogenic 0.064 Stabilizing 1.0 D 0.746 deleterious None None None None N
R/P 0.9779 likely_pathogenic 0.9914 pathogenic 0.35 Stabilizing 1.0 D 0.715 prob.delet. D 0.704105458 None None N
R/Q 0.2276 likely_benign 0.3996 ambiguous 0.012 Stabilizing 1.0 D 0.756 deleterious None None None None N
R/S 0.8467 likely_pathogenic 0.9287 pathogenic -0.36 Destabilizing 1.0 D 0.729 prob.delet. N 0.518302105 None None N
R/T 0.6987 likely_pathogenic 0.8408 pathogenic -0.095 Destabilizing 1.0 D 0.724 prob.delet. None None None None N
R/V 0.7218 likely_pathogenic 0.8188 pathogenic 0.35 Stabilizing 1.0 D 0.731 prob.delet. None None None None N
R/W 0.5275 ambiguous 0.7388 pathogenic -0.119 Destabilizing 1.0 D 0.753 deleterious None None None None N
R/Y 0.7564 likely_pathogenic 0.8927 pathogenic 0.267 Stabilizing 1.0 D 0.738 prob.delet. None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.