Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32572 | 97939;97940;97941 | chr2:178541363;178541362;178541361 | chr2:179406090;179406089;179406088 |
N2AB | 30931 | 93016;93017;93018 | chr2:178541363;178541362;178541361 | chr2:179406090;179406089;179406088 |
N2A | 30004 | 90235;90236;90237 | chr2:178541363;178541362;178541361 | chr2:179406090;179406089;179406088 |
N2B | 23507 | 70744;70745;70746 | chr2:178541363;178541362;178541361 | chr2:179406090;179406089;179406088 |
Novex-1 | 23632 | 71119;71120;71121 | chr2:178541363;178541362;178541361 | chr2:179406090;179406089;179406088 |
Novex-2 | 23699 | 71320;71321;71322 | chr2:178541363;178541362;178541361 | chr2:179406090;179406089;179406088 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.996 | N | 0.739 | 0.356 | 0.330589388543 | gnomAD-4.0.0 | 1.38141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81102E-06 | 0 | 0 |
H/Y | None | None | 0.061 | N | 0.282 | 0.221 | 0.163833314356 | gnomAD-4.0.0 | 1.62164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.47697E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9653 | likely_pathogenic | 0.9723 | pathogenic | -2.215 | Highly Destabilizing | 0.969 | D | 0.799 | deleterious | None | None | None | None | N |
H/C | 0.491 | ambiguous | 0.482 | ambiguous | -1.145 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
H/D | 0.9464 | likely_pathogenic | 0.9608 | pathogenic | -2.078 | Highly Destabilizing | 0.996 | D | 0.791 | deleterious | N | 0.448504215 | None | None | N |
H/E | 0.9618 | likely_pathogenic | 0.969 | pathogenic | -1.859 | Destabilizing | 0.99 | D | 0.723 | prob.delet. | None | None | None | None | N |
H/F | 0.2958 | likely_benign | 0.241 | benign | -0.166 | Destabilizing | 0.046 | N | 0.605 | neutral | None | None | None | None | N |
H/G | 0.9695 | likely_pathogenic | 0.9767 | pathogenic | -2.646 | Highly Destabilizing | 0.99 | D | 0.801 | deleterious | None | None | None | None | N |
H/I | 0.8067 | likely_pathogenic | 0.8243 | pathogenic | -0.907 | Destabilizing | 0.982 | D | 0.814 | deleterious | None | None | None | None | N |
H/K | 0.9813 | likely_pathogenic | 0.9845 | pathogenic | -1.331 | Destabilizing | 0.991 | D | 0.781 | deleterious | None | None | None | None | N |
H/L | 0.5106 | ambiguous | 0.5326 | ambiguous | -0.907 | Destabilizing | 0.852 | D | 0.815 | deleterious | N | 0.375985182 | None | None | N |
H/M | 0.8161 | likely_pathogenic | 0.83 | pathogenic | -0.985 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
H/N | 0.6057 | likely_pathogenic | 0.6899 | pathogenic | -2.184 | Highly Destabilizing | 0.986 | D | 0.72 | prob.delet. | N | 0.467089976 | None | None | N |
H/P | 0.9739 | likely_pathogenic | 0.982 | pathogenic | -1.338 | Destabilizing | 0.996 | D | 0.836 | deleterious | N | 0.467089976 | None | None | N |
H/Q | 0.8866 | likely_pathogenic | 0.9011 | pathogenic | -1.775 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | N | 0.467089976 | None | None | N |
H/R | 0.9413 | likely_pathogenic | 0.9507 | pathogenic | -1.422 | Destabilizing | 0.988 | D | 0.743 | deleterious | N | 0.467089976 | None | None | N |
H/S | 0.9135 | likely_pathogenic | 0.9323 | pathogenic | -2.347 | Highly Destabilizing | 0.969 | D | 0.765 | deleterious | None | None | None | None | N |
H/T | 0.9467 | likely_pathogenic | 0.9618 | pathogenic | -2.006 | Highly Destabilizing | 0.991 | D | 0.818 | deleterious | None | None | None | None | N |
H/V | 0.8174 | likely_pathogenic | 0.8361 | pathogenic | -1.338 | Destabilizing | 0.939 | D | 0.815 | deleterious | None | None | None | None | N |
H/W | 0.5936 | likely_pathogenic | 0.5244 | ambiguous | 0.543 | Stabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
H/Y | 0.1073 | likely_benign | 0.0867 | benign | 0.221 | Stabilizing | 0.061 | N | 0.282 | neutral | N | 0.320057329 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.