Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32574 | 97945;97946;97947 | chr2:178541357;178541356;178541355 | chr2:179406084;179406083;179406082 |
N2AB | 30933 | 93022;93023;93024 | chr2:178541357;178541356;178541355 | chr2:179406084;179406083;179406082 |
N2A | 30006 | 90241;90242;90243 | chr2:178541357;178541356;178541355 | chr2:179406084;179406083;179406082 |
N2B | 23509 | 70750;70751;70752 | chr2:178541357;178541356;178541355 | chr2:179406084;179406083;179406082 |
Novex-1 | 23634 | 71125;71126;71127 | chr2:178541357;178541356;178541355 | chr2:179406084;179406083;179406082 |
Novex-2 | 23701 | 71326;71327;71328 | chr2:178541357;178541356;178541355 | chr2:179406084;179406083;179406082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.782 | D | 0.721 | 0.667 | 0.72613263291 | gnomAD-4.0.0 | 6.92741E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.67543E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6641 | likely_pathogenic | 0.7128 | pathogenic | -2.431 | Highly Destabilizing | 0.296 | N | 0.577 | neutral | D | 0.555935708 | None | None | N |
V/C | 0.9465 | likely_pathogenic | 0.9461 | pathogenic | -2.018 | Highly Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9966 | likely_pathogenic | 0.9971 | pathogenic | -3.402 | Highly Destabilizing | 0.879 | D | 0.865 | deleterious | D | 0.638538087 | None | None | N |
V/E | 0.9901 | likely_pathogenic | 0.9918 | pathogenic | -3.113 | Highly Destabilizing | 0.906 | D | 0.832 | deleterious | None | None | None | None | N |
V/F | 0.8639 | likely_pathogenic | 0.8988 | pathogenic | -1.329 | Destabilizing | 0.782 | D | 0.721 | prob.delet. | D | 0.562683658 | None | None | N |
V/G | 0.8791 | likely_pathogenic | 0.8965 | pathogenic | -3.009 | Highly Destabilizing | 0.879 | D | 0.851 | deleterious | D | 0.638538087 | None | None | N |
V/H | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | -2.839 | Highly Destabilizing | 0.991 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.1181 | likely_benign | 0.1255 | benign | -0.761 | Destabilizing | 0.001 | N | 0.189 | neutral | D | 0.53231297 | None | None | N |
V/K | 0.9945 | likely_pathogenic | 0.9952 | pathogenic | -1.998 | Destabilizing | 0.906 | D | 0.833 | deleterious | None | None | None | None | N |
V/L | 0.6633 | likely_pathogenic | 0.7101 | pathogenic | -0.761 | Destabilizing | 0.031 | N | 0.318 | neutral | N | 0.519950553 | None | None | N |
V/M | 0.7069 | likely_pathogenic | 0.75 | pathogenic | -1.061 | Destabilizing | 0.826 | D | 0.615 | neutral | None | None | None | None | N |
V/N | 0.9866 | likely_pathogenic | 0.989 | pathogenic | -2.569 | Highly Destabilizing | 0.967 | D | 0.883 | deleterious | None | None | None | None | N |
V/P | 0.9931 | likely_pathogenic | 0.994 | pathogenic | -1.298 | Destabilizing | 0.967 | D | 0.844 | deleterious | None | None | None | None | N |
V/Q | 0.9901 | likely_pathogenic | 0.9918 | pathogenic | -2.276 | Highly Destabilizing | 0.967 | D | 0.869 | deleterious | None | None | None | None | N |
V/R | 0.9877 | likely_pathogenic | 0.9895 | pathogenic | -1.963 | Destabilizing | 0.906 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.9315 | likely_pathogenic | 0.944 | pathogenic | -3.102 | Highly Destabilizing | 0.906 | D | 0.793 | deleterious | None | None | None | None | N |
V/T | 0.8399 | likely_pathogenic | 0.8587 | pathogenic | -2.668 | Highly Destabilizing | 0.575 | D | 0.595 | neutral | None | None | None | None | N |
V/W | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -1.931 | Destabilizing | 0.991 | D | 0.849 | deleterious | None | None | None | None | N |
V/Y | 0.99 | likely_pathogenic | 0.9921 | pathogenic | -1.616 | Destabilizing | 0.906 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.