Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32582 | 97969;97970;97971 | chr2:178541333;178541332;178541331 | chr2:179406060;179406059;179406058 |
N2AB | 30941 | 93046;93047;93048 | chr2:178541333;178541332;178541331 | chr2:179406060;179406059;179406058 |
N2A | 30014 | 90265;90266;90267 | chr2:178541333;178541332;178541331 | chr2:179406060;179406059;179406058 |
N2B | 23517 | 70774;70775;70776 | chr2:178541333;178541332;178541331 | chr2:179406060;179406059;179406058 |
Novex-1 | 23642 | 71149;71150;71151 | chr2:178541333;178541332;178541331 | chr2:179406060;179406059;179406058 |
Novex-2 | 23709 | 71350;71351;71352 | chr2:178541333;178541332;178541331 | chr2:179406060;179406059;179406058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.065 | N | 0.626 | 0.039 | 0.332902724076 | gnomAD-4.0.0 | 6.35478E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.29071E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0629 | likely_benign | 0.0628 | benign | -0.466 | Destabilizing | None | N | 0.171 | neutral | N | 0.372102302 | None | None | I |
S/C | 0.0758 | likely_benign | 0.0769 | benign | -0.341 | Destabilizing | 0.196 | N | 0.539 | neutral | N | 0.474056021 | None | None | I |
S/D | 0.3257 | likely_benign | 0.3056 | benign | 0.208 | Stabilizing | None | N | 0.193 | neutral | None | None | None | None | I |
S/E | 0.2827 | likely_benign | 0.2895 | benign | 0.111 | Stabilizing | 0.004 | N | 0.285 | neutral | None | None | None | None | I |
S/F | 0.1216 | likely_benign | 0.147 | benign | -1.07 | Destabilizing | 0.065 | N | 0.626 | neutral | N | 0.451544521 | None | None | I |
S/G | 0.0984 | likely_benign | 0.1008 | benign | -0.564 | Destabilizing | 0.004 | N | 0.266 | neutral | None | None | None | None | I |
S/H | 0.2149 | likely_benign | 0.2204 | benign | -1.058 | Destabilizing | 0.497 | N | 0.542 | neutral | None | None | None | None | I |
S/I | 0.0765 | likely_benign | 0.09 | benign | -0.337 | Destabilizing | 0.009 | N | 0.571 | neutral | None | None | None | None | I |
S/K | 0.3911 | ambiguous | 0.3818 | ambiguous | -0.432 | Destabilizing | 0.018 | N | 0.383 | neutral | None | None | None | None | I |
S/L | 0.0691 | likely_benign | 0.0803 | benign | -0.337 | Destabilizing | 0.004 | N | 0.477 | neutral | None | None | None | None | I |
S/M | 0.1146 | likely_benign | 0.1339 | benign | -0.047 | Destabilizing | 0.245 | N | 0.548 | neutral | None | None | None | None | I |
S/N | 0.0942 | likely_benign | 0.0995 | benign | -0.159 | Destabilizing | 0.009 | N | 0.423 | neutral | None | None | None | None | I |
S/P | 0.0858 | likely_benign | 0.0853 | benign | -0.353 | Destabilizing | None | N | 0.278 | neutral | N | 0.363714892 | None | None | I |
S/Q | 0.2624 | likely_benign | 0.2592 | benign | -0.442 | Destabilizing | 0.085 | N | 0.437 | neutral | None | None | None | None | I |
S/R | 0.3407 | ambiguous | 0.3569 | ambiguous | -0.224 | Destabilizing | 0.044 | N | 0.521 | neutral | None | None | None | None | I |
S/T | 0.0628 | likely_benign | 0.0728 | benign | -0.306 | Destabilizing | None | N | 0.175 | neutral | N | 0.386378321 | None | None | I |
S/V | 0.0893 | likely_benign | 0.1022 | benign | -0.353 | Destabilizing | None | N | 0.393 | neutral | None | None | None | None | I |
S/W | 0.2247 | likely_benign | 0.2542 | benign | -1.035 | Destabilizing | 0.788 | D | 0.621 | neutral | None | None | None | None | I |
S/Y | 0.1324 | likely_benign | 0.1396 | benign | -0.765 | Destabilizing | 0.065 | N | 0.63 | neutral | N | 0.426667506 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.