Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32589 | 97990;97991;97992 | chr2:178541312;178541311;178541310 | chr2:179406039;179406038;179406037 |
N2AB | 30948 | 93067;93068;93069 | chr2:178541312;178541311;178541310 | chr2:179406039;179406038;179406037 |
N2A | 30021 | 90286;90287;90288 | chr2:178541312;178541311;178541310 | chr2:179406039;179406038;179406037 |
N2B | 23524 | 70795;70796;70797 | chr2:178541312;178541311;178541310 | chr2:179406039;179406038;179406037 |
Novex-1 | 23649 | 71170;71171;71172 | chr2:178541312;178541311;178541310 | chr2:179406039;179406038;179406037 |
Novex-2 | 23716 | 71371;71372;71373 | chr2:178541312;178541311;178541310 | chr2:179406039;179406038;179406037 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.997 | N | 0.619 | 0.102 | 0.192905019026 | gnomAD-4.0.0 | 7.19355E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.34103E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2001 | likely_benign | 0.2461 | benign | -0.578 | Destabilizing | 0.994 | D | 0.529 | neutral | N | 0.488442174 | None | None | I |
S/C | 0.1835 | likely_benign | 0.2299 | benign | -0.331 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.505042399 | None | None | I |
S/D | 0.9431 | likely_pathogenic | 0.9667 | pathogenic | -0.361 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | I |
S/E | 0.9749 | likely_pathogenic | 0.9853 | pathogenic | -0.293 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
S/F | 0.8923 | likely_pathogenic | 0.9389 | pathogenic | -0.472 | Destabilizing | 0.999 | D | 0.691 | prob.delet. | N | 0.519170182 | None | None | I |
S/G | 0.1774 | likely_benign | 0.2426 | benign | -0.904 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | I |
S/H | 0.94 | likely_pathogenic | 0.9619 | pathogenic | -1.357 | Destabilizing | 1.0 | D | 0.667 | prob.neutral | None | None | None | None | I |
S/I | 0.7721 | likely_pathogenic | 0.8539 | pathogenic | 0.202 | Stabilizing | 0.999 | D | 0.653 | prob.neutral | None | None | None | None | I |
S/K | 0.9937 | likely_pathogenic | 0.9968 | pathogenic | -0.64 | Destabilizing | 0.998 | D | 0.703 | prob.delet. | None | None | None | None | I |
S/L | 0.4626 | ambiguous | 0.5851 | pathogenic | 0.202 | Stabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
S/M | 0.6546 | likely_pathogenic | 0.7494 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.673 | prob.neutral | None | None | None | None | I |
S/N | 0.7527 | likely_pathogenic | 0.8293 | pathogenic | -0.741 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | I |
S/P | 0.9547 | likely_pathogenic | 0.9757 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.723 | deleterious | N | 0.50478891 | None | None | I |
S/Q | 0.9598 | likely_pathogenic | 0.9733 | pathogenic | -0.695 | Destabilizing | 0.999 | D | 0.722 | deleterious | None | None | None | None | I |
S/R | 0.9868 | likely_pathogenic | 0.9931 | pathogenic | -0.746 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
S/T | 0.1241 | likely_benign | 0.1512 | benign | -0.628 | Destabilizing | 0.997 | D | 0.619 | neutral | N | 0.477514827 | None | None | I |
S/V | 0.5912 | likely_pathogenic | 0.6947 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/W | 0.9308 | likely_pathogenic | 0.9611 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
S/Y | 0.8931 | likely_pathogenic | 0.9415 | pathogenic | -0.266 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | D | 0.530779977 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.