Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32591 | 97996;97997;97998 | chr2:178541306;178541305;178541304 | chr2:179406033;179406032;179406031 |
N2AB | 30950 | 93073;93074;93075 | chr2:178541306;178541305;178541304 | chr2:179406033;179406032;179406031 |
N2A | 30023 | 90292;90293;90294 | chr2:178541306;178541305;178541304 | chr2:179406033;179406032;179406031 |
N2B | 23526 | 70801;70802;70803 | chr2:178541306;178541305;178541304 | chr2:179406033;179406032;179406031 |
Novex-1 | 23651 | 71176;71177;71178 | chr2:178541306;178541305;178541304 | chr2:179406033;179406032;179406031 |
Novex-2 | 23718 | 71377;71378;71379 | chr2:178541306;178541305;178541304 | chr2:179406033;179406032;179406031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 0.993 | N | 0.717 | 0.413 | 0.563655836063 | gnomAD-4.0.0 | 1.44754E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.87663E-06 | 0 | 0 |
P/R | None | None | 0.868 | N | 0.731 | 0.283 | 0.494299846589 | gnomAD-4.0.0 | 7.23772E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.74429E-05 |
P/T | None | None | 0.483 | N | 0.485 | 0.151 | 0.337621943819 | gnomAD-4.0.0 | 7.22291E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.74058E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0796 | likely_benign | 0.079 | benign | -0.876 | Destabilizing | 0.278 | N | 0.499 | neutral | N | 0.517396658 | None | None | N |
P/C | 0.4345 | ambiguous | 0.4694 | ambiguous | -0.72 | Destabilizing | 0.995 | D | 0.781 | deleterious | None | None | None | None | N |
P/D | 0.6599 | likely_pathogenic | 0.7285 | pathogenic | -0.713 | Destabilizing | 0.712 | D | 0.551 | neutral | None | None | None | None | N |
P/E | 0.4354 | ambiguous | 0.4941 | ambiguous | -0.797 | Destabilizing | 0.712 | D | 0.545 | neutral | None | None | None | None | N |
P/F | 0.5606 | ambiguous | 0.625 | pathogenic | -0.848 | Destabilizing | 0.946 | D | 0.78 | deleterious | None | None | None | None | N |
P/G | 0.2612 | likely_benign | 0.2975 | benign | -1.072 | Destabilizing | 0.553 | D | 0.559 | neutral | None | None | None | None | N |
P/H | 0.2986 | likely_benign | 0.3481 | ambiguous | -0.501 | Destabilizing | 0.993 | D | 0.717 | prob.delet. | N | 0.512915299 | None | None | N |
P/I | 0.3973 | ambiguous | 0.4438 | ambiguous | -0.484 | Destabilizing | 0.032 | N | 0.547 | neutral | None | None | None | None | N |
P/K | 0.3814 | ambiguous | 0.4442 | ambiguous | -0.795 | Destabilizing | 0.712 | D | 0.553 | neutral | None | None | None | None | N |
P/L | 0.2078 | likely_benign | 0.2487 | benign | -0.484 | Destabilizing | 0.278 | N | 0.605 | neutral | N | 0.51126012 | None | None | N |
P/M | 0.3594 | ambiguous | 0.4056 | ambiguous | -0.436 | Destabilizing | 0.946 | D | 0.738 | deleterious | None | None | None | None | N |
P/N | 0.393 | ambiguous | 0.4521 | ambiguous | -0.535 | Destabilizing | 0.897 | D | 0.656 | prob.neutral | None | None | None | None | N |
P/Q | 0.2334 | likely_benign | 0.2674 | benign | -0.792 | Destabilizing | 0.946 | D | 0.617 | neutral | None | None | None | None | N |
P/R | 0.2733 | likely_benign | 0.3209 | benign | -0.17 | Destabilizing | 0.868 | D | 0.731 | deleterious | N | 0.488036641 | None | None | N |
P/S | 0.1444 | likely_benign | 0.1616 | benign | -0.935 | Destabilizing | 0.024 | N | 0.331 | neutral | N | 0.483250474 | None | None | N |
P/T | 0.1243 | likely_benign | 0.1453 | benign | -0.919 | Destabilizing | 0.483 | N | 0.485 | neutral | N | 0.494099801 | None | None | N |
P/V | 0.2595 | likely_benign | 0.2833 | benign | -0.579 | Destabilizing | 0.338 | N | 0.537 | neutral | None | None | None | None | N |
P/W | 0.7002 | likely_pathogenic | 0.7669 | pathogenic | -0.927 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
P/Y | 0.501 | ambiguous | 0.5665 | pathogenic | -0.659 | Destabilizing | 0.982 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.