Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32593 | 98002;98003;98004 | chr2:178541300;178541299;178541298 | chr2:179406027;179406026;179406025 |
N2AB | 30952 | 93079;93080;93081 | chr2:178541300;178541299;178541298 | chr2:179406027;179406026;179406025 |
N2A | 30025 | 90298;90299;90300 | chr2:178541300;178541299;178541298 | chr2:179406027;179406026;179406025 |
N2B | 23528 | 70807;70808;70809 | chr2:178541300;178541299;178541298 | chr2:179406027;179406026;179406025 |
Novex-1 | 23653 | 71182;71183;71184 | chr2:178541300;178541299;178541298 | chr2:179406027;179406026;179406025 |
Novex-2 | 23720 | 71383;71384;71385 | chr2:178541300;178541299;178541298 | chr2:179406027;179406026;179406025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs763858575 | -0.214 | 0.036 | N | 0.249 | 0.067 | 0.436455679973 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs763858575 | -0.214 | 0.036 | N | 0.249 | 0.067 | 0.436455679973 | gnomAD-4.0.0 | 1.1885E-05 | None | None | None | None | I | None | 0 | 2.01711E-05 | None | 0 | 0 | None | 0 | 0 | 1.42592E-05 | 0 | 1.70952E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1654 | likely_benign | 0.1782 | benign | -1.146 | Destabilizing | 0.682 | D | 0.468 | neutral | N | 0.4902287 | None | None | I |
V/C | 0.6866 | likely_pathogenic | 0.6796 | pathogenic | -0.735 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | I |
V/D | 0.5858 | likely_pathogenic | 0.6077 | pathogenic | -1.028 | Destabilizing | 0.979 | D | 0.799 | deleterious | N | 0.484642826 | None | None | I |
V/E | 0.4015 | ambiguous | 0.4253 | ambiguous | -1.072 | Destabilizing | 0.984 | D | 0.749 | deleterious | None | None | None | None | I |
V/F | 0.1744 | likely_benign | 0.1778 | benign | -0.981 | Destabilizing | 0.95 | D | 0.757 | deleterious | N | 0.507814383 | None | None | I |
V/G | 0.3221 | likely_benign | 0.3525 | ambiguous | -1.406 | Destabilizing | 0.938 | D | 0.763 | deleterious | N | 0.513342918 | None | None | I |
V/H | 0.5841 | likely_pathogenic | 0.5919 | pathogenic | -0.882 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | I |
V/I | 0.0808 | likely_benign | 0.0772 | benign | -0.56 | Destabilizing | 0.036 | N | 0.249 | neutral | N | 0.489535267 | None | None | I |
V/K | 0.3236 | likely_benign | 0.3552 | ambiguous | -1.003 | Destabilizing | 0.953 | D | 0.748 | deleterious | None | None | None | None | I |
V/L | 0.1615 | likely_benign | 0.1536 | benign | -0.56 | Destabilizing | 0.279 | N | 0.516 | neutral | N | 0.487092394 | None | None | I |
V/M | 0.135 | likely_benign | 0.1368 | benign | -0.418 | Destabilizing | 0.909 | D | 0.702 | prob.delet. | None | None | None | None | I |
V/N | 0.4372 | ambiguous | 0.4299 | ambiguous | -0.746 | Destabilizing | 0.984 | D | 0.801 | deleterious | None | None | None | None | I |
V/P | 0.4483 | ambiguous | 0.4507 | ambiguous | -0.72 | Destabilizing | 0.984 | D | 0.787 | deleterious | None | None | None | None | I |
V/Q | 0.3381 | likely_benign | 0.3513 | ambiguous | -0.965 | Destabilizing | 0.984 | D | 0.769 | deleterious | None | None | None | None | I |
V/R | 0.2482 | likely_benign | 0.2848 | benign | -0.402 | Destabilizing | 0.984 | D | 0.788 | deleterious | None | None | None | None | I |
V/S | 0.2792 | likely_benign | 0.2833 | benign | -1.182 | Destabilizing | 0.953 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/T | 0.1501 | likely_benign | 0.1549 | benign | -1.122 | Destabilizing | 0.74 | D | 0.631 | neutral | None | None | None | None | I |
V/W | 0.7515 | likely_pathogenic | 0.7677 | pathogenic | -1.127 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/Y | 0.5322 | ambiguous | 0.5268 | ambiguous | -0.844 | Destabilizing | 0.953 | D | 0.781 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.