Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32600 | 98023;98024;98025 | chr2:178540368;178540367;178540366 | chr2:179405095;179405094;179405093 |
N2AB | 30959 | 93100;93101;93102 | chr2:178540368;178540367;178540366 | chr2:179405095;179405094;179405093 |
N2A | 30032 | 90319;90320;90321 | chr2:178540368;178540367;178540366 | chr2:179405095;179405094;179405093 |
N2B | 23535 | 70828;70829;70830 | chr2:178540368;178540367;178540366 | chr2:179405095;179405094;179405093 |
Novex-1 | 23660 | 71203;71204;71205 | chr2:178540368;178540367;178540366 | chr2:179405095;179405094;179405093 |
Novex-2 | 23727 | 71404;71405;71406 | chr2:178540368;178540367;178540366 | chr2:179405095;179405094;179405093 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.999 | N | 0.811 | 0.352 | 0.318252033908 | gnomAD-4.0.0 | 1.59954E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87282E-06 | 0 | 0 |
P/T | None | None | 1.0 | N | 0.828 | 0.379 | 0.547212138244 | gnomAD-4.0.0 | 1.59954E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87282E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.108 | likely_benign | 0.1279 | benign | -0.411 | Destabilizing | 0.999 | D | 0.811 | deleterious | N | 0.4719044 | None | None | I |
P/C | 0.5871 | likely_pathogenic | 0.6768 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
P/D | 0.8745 | likely_pathogenic | 0.9219 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
P/E | 0.5802 | likely_pathogenic | 0.6731 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
P/F | 0.6874 | likely_pathogenic | 0.7803 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
P/G | 0.6596 | likely_pathogenic | 0.7373 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
P/H | 0.4346 | ambiguous | 0.5545 | ambiguous | -0.199 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.522310507 | None | None | I |
P/I | 0.3444 | ambiguous | 0.4182 | ambiguous | -0.309 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
P/K | 0.4166 | ambiguous | 0.517 | ambiguous | -0.093 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
P/L | 0.1711 | likely_benign | 0.2126 | benign | -0.309 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.482681729 | None | None | I |
P/M | 0.4412 | ambiguous | 0.5103 | ambiguous | -0.175 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
P/N | 0.739 | likely_pathogenic | 0.8184 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/Q | 0.2991 | likely_benign | 0.3773 | ambiguous | -0.204 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
P/R | 0.2769 | likely_benign | 0.366 | ambiguous | 0.352 | Stabilizing | 1.0 | D | 0.868 | deleterious | N | 0.502938804 | None | None | I |
P/S | 0.2894 | likely_benign | 0.3703 | ambiguous | -0.262 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.498165864 | None | None | I |
P/T | 0.2402 | likely_benign | 0.3166 | benign | -0.291 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.502685315 | None | None | I |
P/V | 0.2337 | likely_benign | 0.2798 | benign | -0.31 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
P/W | 0.8729 | likely_pathogenic | 0.9279 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
P/Y | 0.6763 | likely_pathogenic | 0.7741 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.