Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32603 | 98032;98033;98034 | chr2:178540359;178540358;178540357 | chr2:179405086;179405085;179405084 |
N2AB | 30962 | 93109;93110;93111 | chr2:178540359;178540358;178540357 | chr2:179405086;179405085;179405084 |
N2A | 30035 | 90328;90329;90330 | chr2:178540359;178540358;178540357 | chr2:179405086;179405085;179405084 |
N2B | 23538 | 70837;70838;70839 | chr2:178540359;178540358;178540357 | chr2:179405086;179405085;179405084 |
Novex-1 | 23663 | 71212;71213;71214 | chr2:178540359;178540358;178540357 | chr2:179405086;179405085;179405084 |
Novex-2 | 23730 | 71413;71414;71415 | chr2:178540359;178540358;178540357 | chr2:179405086;179405085;179405084 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs778929590 | -0.414 | 0.006 | N | 0.348 | 0.052 | 0.184867976434 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66945E-04 |
K/R | rs778929590 | -0.414 | 0.006 | N | 0.348 | 0.052 | 0.184867976434 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
K/R | rs778929590 | -0.414 | 0.006 | N | 0.348 | 0.052 | 0.184867976434 | gnomAD-4.0.0 | 6.57047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2534 | likely_benign | 0.2824 | benign | -0.388 | Destabilizing | 0.013 | N | 0.375 | neutral | None | None | None | None | N |
K/C | 0.4858 | ambiguous | 0.4844 | ambiguous | -0.405 | Destabilizing | 0.995 | D | 0.65 | neutral | None | None | None | None | N |
K/D | 0.6599 | likely_pathogenic | 0.6809 | pathogenic | -0.18 | Destabilizing | 0.828 | D | 0.597 | neutral | None | None | None | None | N |
K/E | 0.2133 | likely_benign | 0.2431 | benign | -0.094 | Destabilizing | 0.642 | D | 0.517 | neutral | N | 0.456662339 | None | None | N |
K/F | 0.6829 | likely_pathogenic | 0.695 | pathogenic | -0.077 | Destabilizing | 0.944 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/G | 0.4621 | ambiguous | 0.495 | ambiguous | -0.74 | Destabilizing | 0.704 | D | 0.62 | neutral | None | None | None | None | N |
K/H | 0.343 | ambiguous | 0.3548 | ambiguous | -1.116 | Destabilizing | 0.944 | D | 0.593 | neutral | None | None | None | None | N |
K/I | 0.2416 | likely_benign | 0.251 | benign | 0.515 | Stabilizing | 0.031 | N | 0.53 | neutral | None | None | None | None | N |
K/L | 0.2932 | likely_benign | 0.302 | benign | 0.515 | Stabilizing | 0.329 | N | 0.575 | neutral | None | None | None | None | N |
K/M | 0.188 | likely_benign | 0.2037 | benign | 0.379 | Stabilizing | 0.927 | D | 0.589 | neutral | N | 0.501936056 | None | None | N |
K/N | 0.4388 | ambiguous | 0.4673 | ambiguous | -0.346 | Destabilizing | 0.642 | D | 0.524 | neutral | N | 0.501069264 | None | None | N |
K/P | 0.2509 | likely_benign | 0.2453 | benign | 0.245 | Stabilizing | 0.003 | N | 0.365 | neutral | None | None | None | None | N |
K/Q | 0.1394 | likely_benign | 0.149 | benign | -0.448 | Destabilizing | 0.642 | D | 0.52 | neutral | N | 0.441116883 | None | None | N |
K/R | 0.0906 | likely_benign | 0.0925 | benign | -0.628 | Destabilizing | 0.006 | N | 0.348 | neutral | N | 0.448197571 | None | None | N |
K/S | 0.3606 | ambiguous | 0.4057 | ambiguous | -0.927 | Destabilizing | 0.329 | N | 0.499 | neutral | None | None | None | None | N |
K/T | 0.1992 | likely_benign | 0.2229 | benign | -0.649 | Destabilizing | 0.642 | D | 0.597 | neutral | N | 0.445215981 | None | None | N |
K/V | 0.2447 | likely_benign | 0.2532 | benign | 0.245 | Stabilizing | 0.329 | N | 0.584 | neutral | None | None | None | None | N |
K/W | 0.7643 | likely_pathogenic | 0.783 | pathogenic | 0.024 | Stabilizing | 0.995 | D | 0.656 | neutral | None | None | None | None | N |
K/Y | 0.5433 | ambiguous | 0.5513 | ambiguous | 0.3 | Stabilizing | 0.981 | D | 0.674 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.