Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32606 | 98041;98042;98043 | chr2:178540350;178540349;178540348 | chr2:179405077;179405076;179405075 |
N2AB | 30965 | 93118;93119;93120 | chr2:178540350;178540349;178540348 | chr2:179405077;179405076;179405075 |
N2A | 30038 | 90337;90338;90339 | chr2:178540350;178540349;178540348 | chr2:179405077;179405076;179405075 |
N2B | 23541 | 70846;70847;70848 | chr2:178540350;178540349;178540348 | chr2:179405077;179405076;179405075 |
Novex-1 | 23666 | 71221;71222;71223 | chr2:178540350;178540349;178540348 | chr2:179405077;179405076;179405075 |
Novex-2 | 23733 | 71422;71423;71424 | chr2:178540350;178540349;178540348 | chr2:179405077;179405076;179405075 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.684 | N | 0.375 | 0.295 | 0.159798565429 | gnomAD-4.0.0 | 1.59441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86497E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3921 | ambiguous | 0.379 | ambiguous | -0.366 | Destabilizing | 0.742 | D | 0.354 | neutral | None | None | None | None | N |
N/C | 0.3259 | likely_benign | 0.3276 | benign | 0.312 | Stabilizing | 0.996 | D | 0.478 | neutral | None | None | None | None | N |
N/D | 0.249 | likely_benign | 0.2396 | benign | -0.004 | Destabilizing | 0.684 | D | 0.381 | neutral | N | 0.50545915 | None | None | N |
N/E | 0.4905 | ambiguous | 0.4639 | ambiguous | -0.034 | Destabilizing | 0.59 | D | 0.326 | neutral | None | None | None | None | N |
N/F | 0.4942 | ambiguous | 0.4895 | ambiguous | -0.672 | Destabilizing | 0.91 | D | 0.443 | neutral | None | None | None | None | N |
N/G | 0.5624 | ambiguous | 0.5481 | ambiguous | -0.554 | Destabilizing | 0.854 | D | 0.335 | neutral | None | None | None | None | N |
N/H | 0.1476 | likely_benign | 0.1582 | benign | -0.553 | Destabilizing | 0.939 | D | 0.423 | neutral | N | 0.483759637 | None | None | N |
N/I | 0.2766 | likely_benign | 0.2742 | benign | 0.043 | Stabilizing | 0.015 | N | 0.322 | neutral | N | 0.503167338 | None | None | N |
N/K | 0.4343 | ambiguous | 0.4444 | ambiguous | 0.054 | Stabilizing | 0.028 | N | 0.216 | neutral | N | 0.519505883 | None | None | N |
N/L | 0.3115 | likely_benign | 0.3072 | benign | 0.043 | Stabilizing | 0.331 | N | 0.397 | neutral | None | None | None | None | N |
N/M | 0.3612 | ambiguous | 0.3635 | ambiguous | 0.416 | Stabilizing | 0.91 | D | 0.419 | neutral | None | None | None | None | N |
N/P | 0.8803 | likely_pathogenic | 0.8481 | pathogenic | -0.066 | Destabilizing | 0.984 | D | 0.448 | neutral | None | None | None | None | N |
N/Q | 0.3939 | ambiguous | 0.3956 | ambiguous | -0.447 | Destabilizing | 0.101 | N | 0.146 | neutral | None | None | None | None | N |
N/R | 0.4872 | ambiguous | 0.5008 | ambiguous | 0.138 | Stabilizing | 0.59 | D | 0.355 | neutral | None | None | None | None | N |
N/S | 0.1947 | likely_benign | 0.1899 | benign | -0.204 | Destabilizing | 0.684 | D | 0.375 | neutral | N | 0.477074139 | None | None | N |
N/T | 0.2701 | likely_benign | 0.2629 | benign | -0.089 | Destabilizing | 0.684 | D | 0.316 | neutral | N | 0.477821381 | None | None | N |
N/V | 0.3022 | likely_benign | 0.289 | benign | -0.066 | Destabilizing | 0.331 | N | 0.398 | neutral | None | None | None | None | N |
N/W | 0.794 | likely_pathogenic | 0.8044 | pathogenic | -0.622 | Destabilizing | 0.996 | D | 0.615 | neutral | None | None | None | None | N |
N/Y | 0.1346 | likely_benign | 0.1414 | benign | -0.37 | Destabilizing | 0.939 | D | 0.449 | neutral | D | 0.533388367 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.