Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32616 | 98071;98072;98073 | chr2:178540320;178540319;178540318 | chr2:179405047;179405046;179405045 |
N2AB | 30975 | 93148;93149;93150 | chr2:178540320;178540319;178540318 | chr2:179405047;179405046;179405045 |
N2A | 30048 | 90367;90368;90369 | chr2:178540320;178540319;178540318 | chr2:179405047;179405046;179405045 |
N2B | 23551 | 70876;70877;70878 | chr2:178540320;178540319;178540318 | chr2:179405047;179405046;179405045 |
Novex-1 | 23676 | 71251;71252;71253 | chr2:178540320;178540319;178540318 | chr2:179405047;179405046;179405045 |
Novex-2 | 23743 | 71452;71453;71454 | chr2:178540320;178540319;178540318 | chr2:179405047;179405046;179405045 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.999 | N | 0.489 | 0.322 | 0.402614778071 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2561 | likely_benign | 0.2275 | benign | -0.384 | Destabilizing | 0.997 | D | 0.461 | neutral | N | 0.493914628 | None | None | N |
S/C | 0.3736 | ambiguous | 0.3866 | ambiguous | -0.812 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
S/D | 0.9555 | likely_pathogenic | 0.9519 | pathogenic | -1.651 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
S/E | 0.9656 | likely_pathogenic | 0.9557 | pathogenic | -1.639 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
S/F | 0.8663 | likely_pathogenic | 0.8552 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/G | 0.4217 | ambiguous | 0.3907 | ambiguous | -0.554 | Destabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | N |
S/H | 0.8704 | likely_pathogenic | 0.8686 | pathogenic | -1.159 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
S/I | 0.9019 | likely_pathogenic | 0.8965 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
S/K | 0.988 | likely_pathogenic | 0.9858 | pathogenic | -0.47 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
S/L | 0.6538 | likely_pathogenic | 0.6462 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.530580891 | None | None | N |
S/M | 0.6218 | likely_pathogenic | 0.6268 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
S/N | 0.727 | likely_pathogenic | 0.7359 | pathogenic | -0.838 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
S/P | 0.9983 | likely_pathogenic | 0.9984 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.530580891 | None | None | N |
S/Q | 0.9371 | likely_pathogenic | 0.9225 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
S/R | 0.9795 | likely_pathogenic | 0.9763 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/T | 0.1278 | likely_benign | 0.1515 | benign | -0.609 | Destabilizing | 0.999 | D | 0.489 | neutral | N | 0.478928697 | None | None | N |
S/V | 0.791 | likely_pathogenic | 0.7871 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
S/W | 0.9178 | likely_pathogenic | 0.9149 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
S/Y | 0.8227 | likely_pathogenic | 0.81 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.