Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3262 | 10009;10010;10011 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
N2AB | 3262 | 10009;10010;10011 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
N2A | 3262 | 10009;10010;10011 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
N2B | 3216 | 9871;9872;9873 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
Novex-1 | 3216 | 9871;9872;9873 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
Novex-2 | 3216 | 9871;9872;9873 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
Novex-3 | 3262 | 10009;10010;10011 | chr2:178764731;178764730;178764729 | chr2:179629458;179629457;179629456 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.19 | N | 0.393 | 0.222 | 0.54988173901 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9206 | likely_pathogenic | 0.9625 | pathogenic | -2.713 | Highly Destabilizing | 0.415 | N | 0.685 | prob.neutral | None | None | None | None | N |
I/C | 0.9501 | likely_pathogenic | 0.9746 | pathogenic | -1.881 | Destabilizing | 0.989 | D | 0.782 | deleterious | None | None | None | None | N |
I/D | 0.9985 | likely_pathogenic | 0.9995 | pathogenic | -3.149 | Highly Destabilizing | 0.987 | D | 0.837 | deleterious | None | None | None | None | N |
I/E | 0.996 | likely_pathogenic | 0.9986 | pathogenic | -2.91 | Highly Destabilizing | 0.961 | D | 0.827 | deleterious | None | None | None | None | N |
I/F | 0.3078 | likely_benign | 0.4313 | ambiguous | -1.564 | Destabilizing | 0.923 | D | 0.761 | deleterious | None | None | None | None | N |
I/G | 0.9907 | likely_pathogenic | 0.9966 | pathogenic | -3.254 | Highly Destabilizing | 0.961 | D | 0.803 | deleterious | None | None | None | None | N |
I/H | 0.9884 | likely_pathogenic | 0.9962 | pathogenic | -2.671 | Highly Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | N |
I/K | 0.9917 | likely_pathogenic | 0.997 | pathogenic | -2.137 | Highly Destabilizing | 0.949 | D | 0.829 | deleterious | D | 0.622164337 | None | None | N |
I/L | 0.2412 | likely_benign | 0.3496 | ambiguous | -1.131 | Destabilizing | 0.19 | N | 0.393 | neutral | N | 0.501056338 | None | None | N |
I/M | 0.313 | likely_benign | 0.4244 | ambiguous | -1.102 | Destabilizing | 0.901 | D | 0.717 | prob.delet. | D | 0.62041965 | None | None | N |
I/N | 0.9796 | likely_pathogenic | 0.9938 | pathogenic | -2.524 | Highly Destabilizing | 0.987 | D | 0.837 | deleterious | None | None | None | None | N |
I/P | 0.9949 | likely_pathogenic | 0.998 | pathogenic | -1.642 | Destabilizing | 0.987 | D | 0.835 | deleterious | None | None | None | None | N |
I/Q | 0.9902 | likely_pathogenic | 0.9963 | pathogenic | -2.368 | Highly Destabilizing | 0.987 | D | 0.833 | deleterious | None | None | None | None | N |
I/R | 0.985 | likely_pathogenic | 0.9941 | pathogenic | -1.821 | Destabilizing | 0.949 | D | 0.835 | deleterious | D | 0.622164337 | None | None | N |
I/S | 0.9614 | likely_pathogenic | 0.9855 | pathogenic | -3.176 | Highly Destabilizing | 0.923 | D | 0.782 | deleterious | None | None | None | None | N |
I/T | 0.9013 | likely_pathogenic | 0.961 | pathogenic | -2.802 | Highly Destabilizing | 0.722 | D | 0.715 | prob.delet. | N | 0.518838759 | None | None | N |
I/V | 0.1031 | likely_benign | 0.12 | benign | -1.642 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.35973028 | None | None | N |
I/W | 0.9823 | likely_pathogenic | 0.9926 | pathogenic | -1.987 | Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
I/Y | 0.9269 | likely_pathogenic | 0.9649 | pathogenic | -1.725 | Destabilizing | 0.961 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.