Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32627 | 98104;98105;98106 | chr2:178540287;178540286;178540285 | chr2:179405014;179405013;179405012 |
N2AB | 30986 | 93181;93182;93183 | chr2:178540287;178540286;178540285 | chr2:179405014;179405013;179405012 |
N2A | 30059 | 90400;90401;90402 | chr2:178540287;178540286;178540285 | chr2:179405014;179405013;179405012 |
N2B | 23562 | 70909;70910;70911 | chr2:178540287;178540286;178540285 | chr2:179405014;179405013;179405012 |
Novex-1 | 23687 | 71284;71285;71286 | chr2:178540287;178540286;178540285 | chr2:179405014;179405013;179405012 |
Novex-2 | 23754 | 71485;71486;71487 | chr2:178540287;178540286;178540285 | chr2:179405014;179405013;179405012 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.479 | 0.22 | 0.336892272479 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.652 | 0.429 | 0.373357554552 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1998 | likely_benign | 0.2139 | benign | -0.58 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.44192496 | None | None | N |
E/C | 0.8404 | likely_pathogenic | 0.847 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/D | 0.1607 | likely_benign | 0.1508 | benign | -1.106 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.314496793 | None | None | N |
E/F | 0.8356 | likely_pathogenic | 0.8582 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
E/G | 0.2518 | likely_benign | 0.2869 | benign | -0.89 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.478789837 | None | None | N |
E/H | 0.6599 | likely_pathogenic | 0.6948 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
E/I | 0.4976 | ambiguous | 0.5332 | ambiguous | 0.24 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/K | 0.2594 | likely_benign | 0.3411 | ambiguous | -0.241 | Destabilizing | 0.999 | D | 0.652 | neutral | N | 0.47488274 | None | None | N |
E/L | 0.5601 | ambiguous | 0.5988 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/M | 0.5725 | likely_pathogenic | 0.6124 | pathogenic | 0.708 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
E/N | 0.3454 | ambiguous | 0.3427 | ambiguous | -0.585 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/P | 0.5793 | likely_pathogenic | 0.5963 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Q | 0.2375 | likely_benign | 0.2684 | benign | -0.499 | Destabilizing | 1.0 | D | 0.629 | neutral | N | 0.4843103 | None | None | N |
E/R | 0.4133 | ambiguous | 0.4909 | ambiguous | -0.258 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/S | 0.2705 | likely_benign | 0.2798 | benign | -0.857 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/T | 0.2577 | likely_benign | 0.2748 | benign | -0.593 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/V | 0.2965 | likely_benign | 0.331 | benign | -0.011 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.475229457 | None | None | N |
E/W | 0.9474 | likely_pathogenic | 0.9565 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/Y | 0.7353 | likely_pathogenic | 0.7674 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.