Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32631 | 98116;98117;98118 | chr2:178540275;178540274;178540273 | chr2:179405002;179405001;179405000 |
N2AB | 30990 | 93193;93194;93195 | chr2:178540275;178540274;178540273 | chr2:179405002;179405001;179405000 |
N2A | 30063 | 90412;90413;90414 | chr2:178540275;178540274;178540273 | chr2:179405002;179405001;179405000 |
N2B | 23566 | 70921;70922;70923 | chr2:178540275;178540274;178540273 | chr2:179405002;179405001;179405000 |
Novex-1 | 23691 | 71296;71297;71298 | chr2:178540275;178540274;178540273 | chr2:179405002;179405001;179405000 |
Novex-2 | 23758 | 71497;71498;71499 | chr2:178540275;178540274;178540273 | chr2:179405002;179405001;179405000 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs944963846 | 0.519 | 0.852 | N | 0.561 | 0.258 | 0.419835214384 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/I | rs944963846 | 0.519 | 0.852 | N | 0.561 | 0.258 | 0.419835214384 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/I | rs944963846 | 0.519 | 0.852 | N | 0.561 | 0.258 | 0.419835214384 | gnomAD-4.0.0 | 3.84309E-06 | None | None | None | None | I | None | 5.07408E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2924 | likely_benign | 0.3229 | benign | 0.071 | Stabilizing | 0.079 | N | 0.144 | neutral | None | None | None | None | I |
K/C | 0.6885 | likely_pathogenic | 0.7062 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.524 | neutral | None | None | None | None | I |
K/D | 0.5866 | likely_pathogenic | 0.6307 | pathogenic | -0.113 | Destabilizing | 0.991 | D | 0.483 | neutral | None | None | None | None | I |
K/E | 0.2049 | likely_benign | 0.2429 | benign | -0.122 | Destabilizing | 0.959 | D | 0.435 | neutral | N | 0.395227091 | None | None | I |
K/F | 0.7936 | likely_pathogenic | 0.8257 | pathogenic | -0.227 | Destabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | I |
K/G | 0.5021 | ambiguous | 0.5473 | ambiguous | -0.081 | Destabilizing | 0.884 | D | 0.541 | neutral | None | None | None | None | I |
K/H | 0.38 | ambiguous | 0.4001 | ambiguous | -0.227 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
K/I | 0.3712 | ambiguous | 0.3993 | ambiguous | 0.387 | Stabilizing | 0.852 | D | 0.561 | neutral | N | 0.488582756 | None | None | I |
K/L | 0.3669 | ambiguous | 0.4092 | ambiguous | 0.387 | Stabilizing | 0.759 | D | 0.507 | neutral | None | None | None | None | I |
K/M | 0.2794 | likely_benign | 0.322 | benign | 0.099 | Stabilizing | 0.991 | D | 0.478 | neutral | None | None | None | None | I |
K/N | 0.5065 | ambiguous | 0.5498 | ambiguous | 0.242 | Stabilizing | 0.996 | D | 0.41 | neutral | N | 0.456008978 | None | None | I |
K/P | 0.3852 | ambiguous | 0.4124 | ambiguous | 0.306 | Stabilizing | 0.991 | D | 0.497 | neutral | None | None | None | None | I |
K/Q | 0.1682 | likely_benign | 0.1808 | benign | 0.07 | Stabilizing | 0.996 | D | 0.443 | neutral | N | 0.490140194 | None | None | I |
K/R | 0.0844 | likely_benign | 0.088 | benign | 0.047 | Stabilizing | 0.959 | D | 0.437 | neutral | N | 0.43857801 | None | None | I |
K/S | 0.452 | ambiguous | 0.4904 | ambiguous | -0.175 | Destabilizing | 0.884 | D | 0.395 | neutral | None | None | None | None | I |
K/T | 0.216 | likely_benign | 0.2381 | benign | -0.057 | Destabilizing | 0.92 | D | 0.503 | neutral | N | 0.470034281 | None | None | I |
K/V | 0.2855 | likely_benign | 0.3096 | benign | 0.306 | Stabilizing | 0.079 | N | 0.159 | neutral | None | None | None | None | I |
K/W | 0.7943 | likely_pathogenic | 0.8383 | pathogenic | -0.297 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
K/Y | 0.6941 | likely_pathogenic | 0.7396 | pathogenic | 0.063 | Stabilizing | 0.997 | D | 0.551 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.