Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32632 | 98119;98120;98121 | chr2:178540272;178540271;178540270 | chr2:179404999;179404998;179404997 |
N2AB | 30991 | 93196;93197;93198 | chr2:178540272;178540271;178540270 | chr2:179404999;179404998;179404997 |
N2A | 30064 | 90415;90416;90417 | chr2:178540272;178540271;178540270 | chr2:179404999;179404998;179404997 |
N2B | 23567 | 70924;70925;70926 | chr2:178540272;178540271;178540270 | chr2:179404999;179404998;179404997 |
Novex-1 | 23692 | 71299;71300;71301 | chr2:178540272;178540271;178540270 | chr2:179404999;179404998;179404997 |
Novex-2 | 23759 | 71500;71501;71502 | chr2:178540272;178540271;178540270 | chr2:179404999;179404998;179404997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.948 | N | 0.489 | 0.263 | 0.468420198123 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8222 | likely_pathogenic | 0.8237 | pathogenic | -1.807 | Destabilizing | 0.994 | D | 0.594 | neutral | N | 0.518174944 | None | None | I |
V/C | 0.9427 | likely_pathogenic | 0.9346 | pathogenic | -1.335 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
V/D | 0.9738 | likely_pathogenic | 0.9739 | pathogenic | -1.716 | Destabilizing | 0.999 | D | 0.843 | deleterious | N | 0.468952929 | None | None | I |
V/E | 0.9385 | likely_pathogenic | 0.9382 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
V/F | 0.8013 | likely_pathogenic | 0.7984 | pathogenic | -1.405 | Destabilizing | 0.998 | D | 0.827 | deleterious | N | 0.501260645 | None | None | I |
V/G | 0.868 | likely_pathogenic | 0.861 | pathogenic | -2.166 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | D | 0.52224219 | None | None | I |
V/H | 0.9889 | likely_pathogenic | 0.9874 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
V/I | 0.0853 | likely_benign | 0.0784 | benign | -0.903 | Destabilizing | 0.543 | D | 0.257 | neutral | N | 0.385258027 | None | None | I |
V/K | 0.9698 | likely_pathogenic | 0.9678 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
V/L | 0.5112 | ambiguous | 0.4623 | ambiguous | -0.903 | Destabilizing | 0.948 | D | 0.489 | neutral | N | 0.499567754 | None | None | I |
V/M | 0.6002 | likely_pathogenic | 0.5695 | pathogenic | -0.665 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | I |
V/N | 0.9341 | likely_pathogenic | 0.9238 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
V/P | 0.7385 | likely_pathogenic | 0.7351 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
V/Q | 0.9637 | likely_pathogenic | 0.9607 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
V/R | 0.9632 | likely_pathogenic | 0.9612 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
V/S | 0.9266 | likely_pathogenic | 0.9199 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
V/T | 0.8217 | likely_pathogenic | 0.8048 | pathogenic | -1.788 | Destabilizing | 0.996 | D | 0.736 | prob.delet. | None | None | None | None | I |
V/W | 0.9906 | likely_pathogenic | 0.9902 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
V/Y | 0.9638 | likely_pathogenic | 0.9634 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.