Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32636 | 98131;98132;98133 | chr2:178540260;178540259;178540258 | chr2:179404987;179404986;179404985 |
N2AB | 30995 | 93208;93209;93210 | chr2:178540260;178540259;178540258 | chr2:179404987;179404986;179404985 |
N2A | 30068 | 90427;90428;90429 | chr2:178540260;178540259;178540258 | chr2:179404987;179404986;179404985 |
N2B | 23571 | 70936;70937;70938 | chr2:178540260;178540259;178540258 | chr2:179404987;179404986;179404985 |
Novex-1 | 23696 | 71311;71312;71313 | chr2:178540260;178540259;178540258 | chr2:179404987;179404986;179404985 |
Novex-2 | 23763 | 71512;71513;71514 | chr2:178540260;178540259;178540258 | chr2:179404987;179404986;179404985 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs767660102 | -1.647 | 0.998 | N | 0.769 | 0.182 | 0.539970339866 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
L/F | rs767660102 | -1.647 | 0.998 | N | 0.769 | 0.182 | 0.539970339866 | gnomAD-4.0.0 | 1.59117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6814 | likely_pathogenic | 0.6848 | pathogenic | -2.748 | Highly Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
L/C | 0.6598 | likely_pathogenic | 0.6417 | pathogenic | -2.197 | Highly Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
L/D | 0.9406 | likely_pathogenic | 0.9398 | pathogenic | -3.238 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/E | 0.7313 | likely_pathogenic | 0.734 | pathogenic | -3.074 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/F | 0.2076 | likely_benign | 0.1779 | benign | -1.657 | Destabilizing | 0.998 | D | 0.769 | deleterious | N | 0.475768175 | None | None | N |
L/G | 0.9274 | likely_pathogenic | 0.9291 | pathogenic | -3.222 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
L/H | 0.4584 | ambiguous | 0.4352 | ambiguous | -2.529 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/I | 0.1025 | likely_benign | 0.1034 | benign | -1.392 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
L/K | 0.6873 | likely_pathogenic | 0.7004 | pathogenic | -2.189 | Highly Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/M | 0.1472 | likely_benign | 0.1397 | benign | -1.406 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.475480173 | None | None | N |
L/N | 0.7234 | likely_pathogenic | 0.6915 | pathogenic | -2.419 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
L/P | 0.9913 | likely_pathogenic | 0.9939 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/Q | 0.4003 | ambiguous | 0.3956 | ambiguous | -2.394 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/R | 0.5595 | ambiguous | 0.5831 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/S | 0.7044 | likely_pathogenic | 0.6892 | pathogenic | -3.055 | Highly Destabilizing | 0.999 | D | 0.726 | prob.delet. | N | 0.482576717 | None | None | N |
L/T | 0.4918 | ambiguous | 0.4805 | ambiguous | -2.767 | Highly Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
L/V | 0.1337 | likely_benign | 0.1396 | benign | -1.825 | Destabilizing | 0.998 | D | 0.58 | neutral | N | 0.392824291 | None | None | N |
L/W | 0.4195 | ambiguous | 0.4141 | ambiguous | -1.994 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.51372913 | None | None | N |
L/Y | 0.448 | ambiguous | 0.3934 | ambiguous | -1.8 | Destabilizing | 0.91 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.