Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32654 | 98185;98186;98187 | chr2:178540206;178540205;178540204 | chr2:179404933;179404932;179404931 |
N2AB | 31013 | 93262;93263;93264 | chr2:178540206;178540205;178540204 | chr2:179404933;179404932;179404931 |
N2A | 30086 | 90481;90482;90483 | chr2:178540206;178540205;178540204 | chr2:179404933;179404932;179404931 |
N2B | 23589 | 70990;70991;70992 | chr2:178540206;178540205;178540204 | chr2:179404933;179404932;179404931 |
Novex-1 | 23714 | 71365;71366;71367 | chr2:178540206;178540205;178540204 | chr2:179404933;179404932;179404931 |
Novex-2 | 23781 | 71566;71567;71568 | chr2:178540206;178540205;178540204 | chr2:179404933;179404932;179404931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.878 | 0.424 | 0.7065162276 | gnomAD-4.0.0 | 1.5912E-06 | None | None | None | None | N | None | 5.65611E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.257 | likely_benign | 0.2816 | benign | -0.918 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.475368029 | None | None | N |
P/C | 0.9206 | likely_pathogenic | 0.9198 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/D | 0.9735 | likely_pathogenic | 0.9758 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
P/E | 0.8981 | likely_pathogenic | 0.9014 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/F | 0.9531 | likely_pathogenic | 0.9575 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/G | 0.8898 | likely_pathogenic | 0.8953 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/H | 0.8613 | likely_pathogenic | 0.8708 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/I | 0.8009 | likely_pathogenic | 0.7904 | pathogenic | -0.559 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
P/K | 0.923 | likely_pathogenic | 0.9234 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/L | 0.4806 | ambiguous | 0.5166 | ambiguous | -0.559 | Destabilizing | 1.0 | D | 0.878 | deleterious | N | 0.466266676 | None | None | N |
P/M | 0.7987 | likely_pathogenic | 0.7999 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/N | 0.927 | likely_pathogenic | 0.926 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
P/Q | 0.7689 | likely_pathogenic | 0.7737 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.498462715 | None | None | N |
P/R | 0.8369 | likely_pathogenic | 0.8486 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.884 | deleterious | N | 0.48526585 | None | None | N |
P/S | 0.6665 | likely_pathogenic | 0.6969 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.472659004 | None | None | N |
P/T | 0.5877 | likely_pathogenic | 0.6157 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.503397493 | None | None | N |
P/V | 0.633 | likely_pathogenic | 0.6265 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/W | 0.9805 | likely_pathogenic | 0.9827 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/Y | 0.9395 | likely_pathogenic | 0.9413 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.