Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32657 | 98194;98195;98196 | chr2:178540197;178540196;178540195 | chr2:179404924;179404923;179404922 |
N2AB | 31016 | 93271;93272;93273 | chr2:178540197;178540196;178540195 | chr2:179404924;179404923;179404922 |
N2A | 30089 | 90490;90491;90492 | chr2:178540197;178540196;178540195 | chr2:179404924;179404923;179404922 |
N2B | 23592 | 70999;71000;71001 | chr2:178540197;178540196;178540195 | chr2:179404924;179404923;179404922 |
Novex-1 | 23717 | 71374;71375;71376 | chr2:178540197;178540196;178540195 | chr2:179404924;179404923;179404922 |
Novex-2 | 23784 | 71575;71576;71577 | chr2:178540197;178540196;178540195 | chr2:179404924;179404923;179404922 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs761994900 | None | 0.817 | N | 0.315 | 0.094 | 0.355034743287 | gnomAD-4.0.0 | 2.73675E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59786E-06 | 0 | 0 |
I/N | None | None | 0.999 | N | 0.679 | 0.44 | 0.81315104837 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7304 | likely_pathogenic | 0.66 | pathogenic | -1.077 | Destabilizing | 0.985 | D | 0.52 | neutral | None | None | None | None | I |
I/C | 0.8348 | likely_pathogenic | 0.7944 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | I |
I/D | 0.8959 | likely_pathogenic | 0.8575 | pathogenic | -0.556 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
I/E | 0.7863 | likely_pathogenic | 0.6978 | pathogenic | -0.551 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | I |
I/F | 0.3072 | likely_benign | 0.298 | benign | -0.664 | Destabilizing | 0.994 | D | 0.499 | neutral | N | 0.508109879 | None | None | I |
I/G | 0.8616 | likely_pathogenic | 0.8067 | pathogenic | -1.341 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
I/H | 0.7913 | likely_pathogenic | 0.733 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
I/K | 0.7595 | likely_pathogenic | 0.6806 | pathogenic | -0.703 | Destabilizing | 0.998 | D | 0.664 | neutral | None | None | None | None | I |
I/L | 0.1858 | likely_benign | 0.1717 | benign | -0.44 | Destabilizing | 0.061 | N | 0.133 | neutral | N | 0.447157421 | None | None | I |
I/M | 0.1361 | likely_benign | 0.1276 | benign | -0.625 | Destabilizing | 0.817 | D | 0.315 | neutral | N | 0.48729189 | None | None | I |
I/N | 0.5046 | ambiguous | 0.4262 | ambiguous | -0.693 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.468762057 | None | None | I |
I/P | 0.9413 | likely_pathogenic | 0.9353 | pathogenic | -0.622 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
I/Q | 0.6804 | likely_pathogenic | 0.5889 | pathogenic | -0.8 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | I |
I/R | 0.7142 | likely_pathogenic | 0.6442 | pathogenic | -0.172 | Destabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | I |
I/S | 0.6271 | likely_pathogenic | 0.5374 | ambiguous | -1.221 | Destabilizing | 0.997 | D | 0.545 | neutral | N | 0.448464143 | None | None | I |
I/T | 0.6574 | likely_pathogenic | 0.5883 | pathogenic | -1.093 | Destabilizing | 0.99 | D | 0.512 | neutral | N | 0.43972723 | None | None | I |
I/V | 0.1776 | likely_benign | 0.1731 | benign | -0.622 | Destabilizing | 0.817 | D | 0.298 | neutral | N | 0.420221536 | None | None | I |
I/W | 0.8498 | likely_pathogenic | 0.8353 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
I/Y | 0.6473 | likely_pathogenic | 0.5754 | pathogenic | -0.48 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.