Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32660 | 98203;98204;98205 | chr2:178540188;178540187;178540186 | chr2:179404915;179404914;179404913 |
N2AB | 31019 | 93280;93281;93282 | chr2:178540188;178540187;178540186 | chr2:179404915;179404914;179404913 |
N2A | 30092 | 90499;90500;90501 | chr2:178540188;178540187;178540186 | chr2:179404915;179404914;179404913 |
N2B | 23595 | 71008;71009;71010 | chr2:178540188;178540187;178540186 | chr2:179404915;179404914;179404913 |
Novex-1 | 23720 | 71383;71384;71385 | chr2:178540188;178540187;178540186 | chr2:179404915;179404914;179404913 |
Novex-2 | 23787 | 71584;71585;71586 | chr2:178540188;178540187;178540186 | chr2:179404915;179404914;179404913 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs781416687 | -1.105 | 1.0 | N | 0.749 | 0.504 | 0.512766428439 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs781416687 | -1.105 | 1.0 | N | 0.749 | 0.504 | 0.512766428439 | gnomAD-4.0.0 | 6.58137E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47115E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9829 | likely_pathogenic | 0.9719 | pathogenic | -2.253 | Highly Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
Y/C | 0.8268 | likely_pathogenic | 0.7353 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.520100529 | None | None | I |
Y/D | 0.9842 | likely_pathogenic | 0.975 | pathogenic | -1.24 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.530284041 | None | None | I |
Y/E | 0.995 | likely_pathogenic | 0.9908 | pathogenic | -1.094 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
Y/F | 0.2215 | likely_benign | 0.195 | benign | -0.753 | Destabilizing | 0.999 | D | 0.541 | neutral | N | 0.438271366 | None | None | I |
Y/G | 0.9606 | likely_pathogenic | 0.9525 | pathogenic | -2.623 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | I |
Y/H | 0.9319 | likely_pathogenic | 0.8807 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.476020501 | None | None | I |
Y/I | 0.9647 | likely_pathogenic | 0.9328 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
Y/K | 0.9915 | likely_pathogenic | 0.9847 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
Y/L | 0.9356 | likely_pathogenic | 0.9024 | pathogenic | -1.101 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
Y/M | 0.9526 | likely_pathogenic | 0.9212 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
Y/N | 0.9413 | likely_pathogenic | 0.9036 | pathogenic | -2.06 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | D | 0.530030551 | None | None | I |
Y/P | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
Y/Q | 0.9919 | likely_pathogenic | 0.983 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
Y/R | 0.9858 | likely_pathogenic | 0.9753 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
Y/S | 0.9721 | likely_pathogenic | 0.9531 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.500316501 | None | None | I |
Y/T | 0.9851 | likely_pathogenic | 0.9733 | pathogenic | -2.322 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
Y/V | 0.9371 | likely_pathogenic | 0.8941 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
Y/W | 0.8728 | likely_pathogenic | 0.8391 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.