Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32664 | 98215;98216;98217 | chr2:178540176;178540175;178540174 | chr2:179404903;179404902;179404901 |
N2AB | 31023 | 93292;93293;93294 | chr2:178540176;178540175;178540174 | chr2:179404903;179404902;179404901 |
N2A | 30096 | 90511;90512;90513 | chr2:178540176;178540175;178540174 | chr2:179404903;179404902;179404901 |
N2B | 23599 | 71020;71021;71022 | chr2:178540176;178540175;178540174 | chr2:179404903;179404902;179404901 |
Novex-1 | 23724 | 71395;71396;71397 | chr2:178540176;178540175;178540174 | chr2:179404903;179404902;179404901 |
Novex-2 | 23791 | 71596;71597;71598 | chr2:178540176;178540175;178540174 | chr2:179404903;179404902;179404901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs794729549 | None | 1.0 | N | 0.703 | 0.22 | 0.146414634003 | gnomAD-4.0.0 | 8.21042E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.02267E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3859 | ambiguous | 0.421 | ambiguous | 0.294 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
H/C | 0.2983 | likely_benign | 0.32 | benign | 0.396 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
H/D | 0.3417 | ambiguous | 0.4129 | ambiguous | -0.144 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.357322064 | None | None | N |
H/E | 0.5515 | ambiguous | 0.624 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
H/F | 0.4602 | ambiguous | 0.5015 | ambiguous | 0.68 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
H/G | 0.3339 | likely_benign | 0.3765 | ambiguous | 0.107 | Stabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
H/I | 0.6607 | likely_pathogenic | 0.7064 | pathogenic | 0.74 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
H/K | 0.4584 | ambiguous | 0.529 | ambiguous | 0.232 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
H/L | 0.2404 | likely_benign | 0.2862 | benign | 0.74 | Stabilizing | 1.0 | D | 0.665 | neutral | N | 0.490332195 | None | None | N |
H/M | 0.6005 | likely_pathogenic | 0.6266 | pathogenic | 0.488 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
H/N | 0.1097 | likely_benign | 0.1429 | benign | 0.139 | Stabilizing | 0.999 | D | 0.616 | neutral | N | 0.340333813 | None | None | N |
H/P | 0.5403 | ambiguous | 0.5533 | ambiguous | 0.613 | Stabilizing | 1.0 | D | 0.644 | neutral | N | 0.456219622 | None | None | N |
H/Q | 0.3222 | likely_benign | 0.3874 | ambiguous | 0.169 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.455699547 | None | None | N |
H/R | 0.2518 | likely_benign | 0.3224 | benign | -0.117 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.394189728 | None | None | N |
H/S | 0.2576 | likely_benign | 0.2914 | benign | 0.191 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
H/T | 0.4405 | ambiguous | 0.4951 | ambiguous | 0.268 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
H/V | 0.5207 | ambiguous | 0.5693 | pathogenic | 0.613 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
H/W | 0.6196 | likely_pathogenic | 0.6367 | pathogenic | 0.552 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
H/Y | 0.1658 | likely_benign | 0.1971 | benign | 0.832 | Stabilizing | 0.999 | D | 0.613 | neutral | N | 0.490332195 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.