Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32669 | 98230;98231;98232 | chr2:178540161;178540160;178540159 | chr2:179404888;179404887;179404886 |
N2AB | 31028 | 93307;93308;93309 | chr2:178540161;178540160;178540159 | chr2:179404888;179404887;179404886 |
N2A | 30101 | 90526;90527;90528 | chr2:178540161;178540160;178540159 | chr2:179404888;179404887;179404886 |
N2B | 23604 | 71035;71036;71037 | chr2:178540161;178540160;178540159 | chr2:179404888;179404887;179404886 |
Novex-1 | 23729 | 71410;71411;71412 | chr2:178540161;178540160;178540159 | chr2:179404888;179404887;179404886 |
Novex-2 | 23796 | 71611;71612;71613 | chr2:178540161;178540160;178540159 | chr2:179404888;179404887;179404886 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.697 | 0.326 | 0.242244723065 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5005 | ambiguous | 0.4452 | ambiguous | -0.899 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/D | 0.4818 | ambiguous | 0.4625 | ambiguous | -1.662 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
A/E | 0.3746 | ambiguous | 0.3635 | ambiguous | -1.581 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.447677496 | None | None | N |
A/F | 0.5663 | likely_pathogenic | 0.5147 | ambiguous | -0.878 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/G | 0.2275 | likely_benign | 0.2023 | benign | -1.388 | Destabilizing | 1.0 | D | 0.533 | neutral | N | 0.47340266 | None | None | N |
A/H | 0.6748 | likely_pathogenic | 0.6243 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/I | 0.4334 | ambiguous | 0.3896 | ambiguous | -0.115 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/K | 0.6985 | likely_pathogenic | 0.6775 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
A/L | 0.3209 | likely_benign | 0.2756 | benign | -0.115 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/M | 0.2824 | likely_benign | 0.2484 | benign | -0.114 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
A/N | 0.3977 | ambiguous | 0.3671 | ambiguous | -1.318 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
A/P | 0.9312 | likely_pathogenic | 0.9177 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.501616267 | None | None | N |
A/Q | 0.4048 | ambiguous | 0.3778 | ambiguous | -1.321 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
A/R | 0.6646 | likely_pathogenic | 0.6274 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
A/S | 0.1091 | likely_benign | 0.1012 | benign | -1.709 | Destabilizing | 1.0 | D | 0.563 | neutral | N | 0.474997383 | None | None | N |
A/T | 0.123 | likely_benign | 0.1132 | benign | -1.517 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.397184387 | None | None | N |
A/V | 0.2068 | likely_benign | 0.1913 | benign | -0.373 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.450005725 | None | None | N |
A/W | 0.8935 | likely_pathogenic | 0.8563 | pathogenic | -1.439 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
A/Y | 0.6864 | likely_pathogenic | 0.6371 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.