Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3267 | 10024;10025;10026 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
N2AB | 3267 | 10024;10025;10026 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
N2A | 3267 | 10024;10025;10026 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
N2B | 3221 | 9886;9887;9888 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
Novex-1 | 3221 | 9886;9887;9888 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
Novex-2 | 3221 | 9886;9887;9888 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
Novex-3 | 3267 | 10024;10025;10026 | chr2:178764716;178764715;178764714 | chr2:179629443;179629442;179629441 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.454 | N | 0.38 | 0.303 | 0.224531998449 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1878 | likely_benign | 0.2511 | benign | -0.171 | Destabilizing | 0.016 | N | 0.215 | neutral | None | None | None | None | I |
Q/C | 0.7731 | likely_pathogenic | 0.9046 | pathogenic | 0.103 | Stabilizing | 0.993 | D | 0.481 | neutral | None | None | None | None | I |
Q/D | 0.4961 | ambiguous | 0.6773 | pathogenic | 0.037 | Stabilizing | 0.016 | N | 0.179 | neutral | None | None | None | None | I |
Q/E | 0.0941 | likely_benign | 0.1285 | benign | 0.021 | Stabilizing | 0.454 | N | 0.373 | neutral | N | 0.499873248 | None | None | I |
Q/F | 0.7004 | likely_pathogenic | 0.8356 | pathogenic | -0.346 | Destabilizing | 0.974 | D | 0.483 | neutral | None | None | None | None | I |
Q/G | 0.4778 | ambiguous | 0.6637 | pathogenic | -0.367 | Destabilizing | 0.728 | D | 0.453 | neutral | None | None | None | None | I |
Q/H | 0.3021 | likely_benign | 0.4433 | ambiguous | -0.177 | Destabilizing | 0.989 | D | 0.425 | neutral | D | 0.541911499 | None | None | I |
Q/I | 0.3239 | likely_benign | 0.4657 | ambiguous | 0.262 | Stabilizing | 0.949 | D | 0.489 | neutral | None | None | None | None | I |
Q/K | 0.105 | likely_benign | 0.1845 | benign | -0.003 | Destabilizing | 0.454 | N | 0.38 | neutral | N | 0.470615133 | None | None | I |
Q/L | 0.1266 | likely_benign | 0.1937 | benign | 0.262 | Stabilizing | 0.801 | D | 0.454 | neutral | N | 0.510611983 | None | None | I |
Q/M | 0.3464 | ambiguous | 0.4372 | ambiguous | 0.324 | Stabilizing | 0.991 | D | 0.42 | neutral | None | None | None | None | I |
Q/N | 0.3768 | ambiguous | 0.4972 | ambiguous | -0.321 | Destabilizing | 0.842 | D | 0.395 | neutral | None | None | None | None | I |
Q/P | 0.1353 | likely_benign | 0.2062 | benign | 0.146 | Stabilizing | 0.966 | D | 0.433 | neutral | N | 0.473998295 | None | None | I |
Q/R | 0.1392 | likely_benign | 0.2272 | benign | 0.161 | Stabilizing | 0.051 | N | 0.253 | neutral | N | 0.499980229 | None | None | I |
Q/S | 0.2626 | likely_benign | 0.342 | ambiguous | -0.308 | Destabilizing | 0.525 | D | 0.343 | neutral | None | None | None | None | I |
Q/T | 0.2226 | likely_benign | 0.3086 | benign | -0.17 | Destabilizing | 0.842 | D | 0.411 | neutral | None | None | None | None | I |
Q/V | 0.2148 | likely_benign | 0.3019 | benign | 0.146 | Stabilizing | 0.728 | D | 0.475 | neutral | None | None | None | None | I |
Q/W | 0.6833 | likely_pathogenic | 0.8778 | pathogenic | -0.362 | Destabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | I |
Q/Y | 0.5421 | ambiguous | 0.7283 | pathogenic | -0.097 | Destabilizing | 0.991 | D | 0.443 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.