Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32678 | 98257;98258;98259 | chr2:178540134;178540133;178540132 | chr2:179404861;179404860;179404859 |
N2AB | 31037 | 93334;93335;93336 | chr2:178540134;178540133;178540132 | chr2:179404861;179404860;179404859 |
N2A | 30110 | 90553;90554;90555 | chr2:178540134;178540133;178540132 | chr2:179404861;179404860;179404859 |
N2B | 23613 | 71062;71063;71064 | chr2:178540134;178540133;178540132 | chr2:179404861;179404860;179404859 |
Novex-1 | 23738 | 71437;71438;71439 | chr2:178540134;178540133;178540132 | chr2:179404861;179404860;179404859 |
Novex-2 | 23805 | 71638;71639;71640 | chr2:178540134;178540133;178540132 | chr2:179404861;179404860;179404859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs368160975 | -1.764 | 0.999 | N | 0.701 | 0.463 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
C/S | None | None | 0.99 | N | 0.632 | 0.474 | 0.642663040669 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6075 | likely_pathogenic | 0.6195 | pathogenic | -1.009 | Destabilizing | 0.964 | D | 0.447 | neutral | None | None | None | None | N |
C/D | 0.939 | likely_pathogenic | 0.9515 | pathogenic | -1.557 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
C/E | 0.9179 | likely_pathogenic | 0.9282 | pathogenic | -1.405 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
C/F | 0.3193 | likely_benign | 0.3382 | benign | -0.93 | Destabilizing | 0.997 | D | 0.719 | prob.delet. | N | 0.46926349 | None | None | N |
C/G | 0.5513 | ambiguous | 0.5669 | pathogenic | -1.273 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.488542684 | None | None | N |
C/H | 0.7408 | likely_pathogenic | 0.774 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
C/I | 0.4962 | ambiguous | 0.4984 | ambiguous | -0.352 | Destabilizing | 0.971 | D | 0.551 | neutral | None | None | None | None | N |
C/K | 0.9229 | likely_pathogenic | 0.9363 | pathogenic | -0.707 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
C/L | 0.5751 | likely_pathogenic | 0.5758 | pathogenic | -0.352 | Destabilizing | 0.931 | D | 0.559 | neutral | None | None | None | None | N |
C/M | 0.6508 | likely_pathogenic | 0.6576 | pathogenic | -0.005 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | N |
C/N | 0.7915 | likely_pathogenic | 0.8019 | pathogenic | -1.099 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
C/P | 0.9954 | likely_pathogenic | 0.9962 | pathogenic | -0.546 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
C/Q | 0.7729 | likely_pathogenic | 0.7955 | pathogenic | -0.899 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
C/R | 0.7029 | likely_pathogenic | 0.7468 | pathogenic | -1.012 | Destabilizing | 0.999 | D | 0.786 | deleterious | N | 0.414812929 | None | None | N |
C/S | 0.4882 | ambiguous | 0.5078 | ambiguous | -1.25 | Destabilizing | 0.99 | D | 0.632 | neutral | N | 0.452197882 | None | None | N |
C/T | 0.5386 | ambiguous | 0.552 | ambiguous | -0.949 | Destabilizing | 0.985 | D | 0.609 | neutral | None | None | None | None | N |
C/V | 0.3661 | ambiguous | 0.3569 | ambiguous | -0.546 | Destabilizing | 0.469 | N | 0.332 | neutral | None | None | None | None | N |
C/W | 0.6974 | likely_pathogenic | 0.7237 | pathogenic | -1.391 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.469874301 | None | None | N |
C/Y | 0.4756 | ambiguous | 0.5023 | ambiguous | -1.02 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.442076888 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.