Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32681 | 98266;98267;98268 | chr2:178540125;178540124;178540123 | chr2:179404852;179404851;179404850 |
N2AB | 31040 | 93343;93344;93345 | chr2:178540125;178540124;178540123 | chr2:179404852;179404851;179404850 |
N2A | 30113 | 90562;90563;90564 | chr2:178540125;178540124;178540123 | chr2:179404852;179404851;179404850 |
N2B | 23616 | 71071;71072;71073 | chr2:178540125;178540124;178540123 | chr2:179404852;179404851;179404850 |
Novex-1 | 23741 | 71446;71447;71448 | chr2:178540125;178540124;178540123 | chr2:179404852;179404851;179404850 |
Novex-2 | 23808 | 71647;71648;71649 | chr2:178540125;178540124;178540123 | chr2:179404852;179404851;179404850 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | N | 0.789 | 0.42 | 0.277730125212 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1146 | likely_benign | 0.1409 | benign | -0.251 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.358461001 | None | None | I |
G/C | 0.373 | ambiguous | 0.4334 | ambiguous | -0.805 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.475712246 | None | None | I |
G/D | 0.828 | likely_pathogenic | 0.8825 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.484926376 | None | None | I |
G/E | 0.7253 | likely_pathogenic | 0.807 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
G/F | 0.8437 | likely_pathogenic | 0.8776 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/H | 0.8613 | likely_pathogenic | 0.8989 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/I | 0.4946 | ambiguous | 0.5644 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/K | 0.8634 | likely_pathogenic | 0.9049 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
G/L | 0.7129 | likely_pathogenic | 0.7687 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/M | 0.7311 | likely_pathogenic | 0.7797 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/N | 0.768 | likely_pathogenic | 0.8135 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/P | 0.9825 | likely_pathogenic | 0.9851 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
G/Q | 0.7566 | likely_pathogenic | 0.8138 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/R | 0.6997 | likely_pathogenic | 0.7671 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.489044116 | None | None | I |
G/S | 0.2031 | likely_benign | 0.2521 | benign | -0.502 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.458241206 | None | None | I |
G/T | 0.45 | ambiguous | 0.518 | ambiguous | -0.619 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/V | 0.3129 | likely_benign | 0.3679 | ambiguous | -0.349 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.39103478 | None | None | I |
G/W | 0.834 | likely_pathogenic | 0.8664 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/Y | 0.8264 | likely_pathogenic | 0.8722 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.