Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32696 | 98311;98312;98313 | chr2:178540080;178540079;178540078 | chr2:179404807;179404806;179404805 |
N2AB | 31055 | 93388;93389;93390 | chr2:178540080;178540079;178540078 | chr2:179404807;179404806;179404805 |
N2A | 30128 | 90607;90608;90609 | chr2:178540080;178540079;178540078 | chr2:179404807;179404806;179404805 |
N2B | 23631 | 71116;71117;71118 | chr2:178540080;178540079;178540078 | chr2:179404807;179404806;179404805 |
Novex-1 | 23756 | 71491;71492;71493 | chr2:178540080;178540079;178540078 | chr2:179404807;179404806;179404805 |
Novex-2 | 23823 | 71692;71693;71694 | chr2:178540080;178540079;178540078 | chr2:179404807;179404806;179404805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.875 | N | 0.456 | 0.224 | 0.36453787251 | gnomAD-4.0.0 | 1.62592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78536E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1075 | likely_benign | 0.1083 | benign | -0.793 | Destabilizing | 0.622 | D | 0.445 | neutral | N | 0.448435218 | None | None | N |
T/C | 0.3845 | ambiguous | 0.3775 | ambiguous | -0.525 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
T/D | 0.4788 | ambiguous | 0.4695 | ambiguous | -0.352 | Destabilizing | 0.949 | D | 0.459 | neutral | None | None | None | None | N |
T/E | 0.2738 | likely_benign | 0.2644 | benign | -0.382 | Destabilizing | 0.725 | D | 0.425 | neutral | None | None | None | None | N |
T/F | 0.3471 | ambiguous | 0.3621 | ambiguous | -1.02 | Destabilizing | 0.949 | D | 0.694 | prob.delet. | None | None | None | None | N |
T/G | 0.3316 | likely_benign | 0.3297 | benign | -1.004 | Destabilizing | 0.915 | D | 0.531 | neutral | None | None | None | None | N |
T/H | 0.3269 | likely_benign | 0.3344 | benign | -1.317 | Destabilizing | 0.993 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/I | 0.1713 | likely_benign | 0.1908 | benign | -0.332 | Destabilizing | 0.875 | D | 0.456 | neutral | N | 0.445781702 | None | None | N |
T/K | 0.2181 | likely_benign | 0.2259 | benign | -0.699 | Destabilizing | 0.725 | D | 0.513 | neutral | None | None | None | None | N |
T/L | 0.1196 | likely_benign | 0.1257 | benign | -0.332 | Destabilizing | 0.476 | N | 0.461 | neutral | None | None | None | None | N |
T/M | 0.0951 | likely_benign | 0.0955 | benign | 0.074 | Stabilizing | 0.522 | D | 0.453 | neutral | None | None | None | None | N |
T/N | 0.1693 | likely_benign | 0.1727 | benign | -0.585 | Destabilizing | 0.966 | D | 0.473 | neutral | N | 0.478411409 | None | None | N |
T/P | 0.5886 | likely_pathogenic | 0.5839 | pathogenic | -0.455 | Destabilizing | 0.989 | D | 0.532 | neutral | N | 0.498306678 | None | None | N |
T/Q | 0.2091 | likely_benign | 0.2076 | benign | -0.869 | Destabilizing | 0.171 | N | 0.351 | neutral | None | None | None | None | N |
T/R | 0.1975 | likely_benign | 0.2097 | benign | -0.381 | Destabilizing | 0.949 | D | 0.455 | neutral | None | None | None | None | N |
T/S | 0.1439 | likely_benign | 0.1468 | benign | -0.854 | Destabilizing | 0.799 | D | 0.46 | neutral | N | 0.49709317 | None | None | N |
T/V | 0.1309 | likely_benign | 0.1395 | benign | -0.455 | Destabilizing | 0.725 | D | 0.428 | neutral | None | None | None | None | N |
T/W | 0.6655 | likely_pathogenic | 0.668 | pathogenic | -0.914 | Destabilizing | 0.998 | D | 0.735 | deleterious | None | None | None | None | N |
T/Y | 0.4016 | ambiguous | 0.3994 | ambiguous | -0.682 | Destabilizing | 0.974 | D | 0.703 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.