Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32697 | 98314;98315;98316 | chr2:178540077;178540076;178540075 | chr2:179404804;179404803;179404802 |
N2AB | 31056 | 93391;93392;93393 | chr2:178540077;178540076;178540075 | chr2:179404804;179404803;179404802 |
N2A | 30129 | 90610;90611;90612 | chr2:178540077;178540076;178540075 | chr2:179404804;179404803;179404802 |
N2B | 23632 | 71119;71120;71121 | chr2:178540077;178540076;178540075 | chr2:179404804;179404803;179404802 |
Novex-1 | 23757 | 71494;71495;71496 | chr2:178540077;178540076;178540075 | chr2:179404804;179404803;179404802 |
Novex-2 | 23824 | 71695;71696;71697 | chr2:178540077;178540076;178540075 | chr2:179404804;179404803;179404802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs748057839 | -0.025 | 0.997 | N | 0.586 | 0.142 | 0.274366138417 | gnomAD-2.1.1 | 2.95E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.11862E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs748057839 | -0.025 | 0.997 | N | 0.586 | 0.142 | 0.274366138417 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs748057839 | -0.025 | 0.997 | N | 0.586 | 0.142 | 0.274366138417 | gnomAD-4.0.0 | 6.25188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.01279E-04 | None | 0 | 0 | 0 | 0 | 1.61943E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7932 | likely_pathogenic | 0.7735 | pathogenic | -0.102 | Destabilizing | 0.997 | D | 0.735 | deleterious | N | 0.508814461 | None | None | N |
E/C | 0.9951 | likely_pathogenic | 0.9948 | pathogenic | 0.112 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/D | 0.317 | likely_benign | 0.2948 | benign | -0.183 | Destabilizing | 0.997 | D | 0.586 | neutral | N | 0.445168414 | None | None | N |
E/F | 0.9968 | likely_pathogenic | 0.9965 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/G | 0.8163 | likely_pathogenic | 0.7995 | pathogenic | -0.237 | Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.492276149 | None | None | N |
E/H | 0.9788 | likely_pathogenic | 0.9756 | pathogenic | 0.201 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/I | 0.9852 | likely_pathogenic | 0.9832 | pathogenic | 0.199 | Stabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
E/K | 0.877 | likely_pathogenic | 0.8626 | pathogenic | 0.585 | Stabilizing | 0.997 | D | 0.715 | prob.delet. | N | 0.482993304 | None | None | N |
E/L | 0.9763 | likely_pathogenic | 0.9747 | pathogenic | 0.199 | Stabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
E/M | 0.9792 | likely_pathogenic | 0.9764 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/N | 0.8759 | likely_pathogenic | 0.847 | pathogenic | 0.355 | Stabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
E/P | 0.9291 | likely_pathogenic | 0.9101 | pathogenic | 0.118 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/Q | 0.7561 | likely_pathogenic | 0.7377 | pathogenic | 0.369 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | N | 0.501097559 | None | None | N |
E/R | 0.938 | likely_pathogenic | 0.9296 | pathogenic | 0.685 | Stabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
E/S | 0.8392 | likely_pathogenic | 0.8125 | pathogenic | 0.219 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
E/T | 0.934 | likely_pathogenic | 0.9225 | pathogenic | 0.335 | Stabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
E/V | 0.9395 | likely_pathogenic | 0.9345 | pathogenic | 0.118 | Stabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.503885944 | None | None | N |
E/W | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/Y | 0.991 | likely_pathogenic | 0.9897 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.