Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32708 | 98347;98348;98349 | chr2:178539943;178539942;178539941 | chr2:179404670;179404669;179404668 |
N2AB | 31067 | 93424;93425;93426 | chr2:178539943;178539942;178539941 | chr2:179404670;179404669;179404668 |
N2A | 30140 | 90643;90644;90645 | chr2:178539943;178539942;178539941 | chr2:179404670;179404669;179404668 |
N2B | 23643 | 71152;71153;71154 | chr2:178539943;178539942;178539941 | chr2:179404670;179404669;179404668 |
Novex-1 | 23768 | 71527;71528;71529 | chr2:178539943;178539942;178539941 | chr2:179404670;179404669;179404668 |
Novex-2 | 23835 | 71728;71729;71730 | chr2:178539943;178539942;178539941 | chr2:179404670;179404669;179404668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1428233034 | 0.255 | 0.064 | N | 0.171 | 0.227 | 0.268211541103 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 8.7E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66168E-04 |
E/K | rs1428233034 | 0.255 | 0.064 | N | 0.171 | 0.227 | 0.268211541103 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1428233034 | 0.255 | 0.064 | N | 0.171 | 0.227 | 0.268211541103 | gnomAD-4.0.0 | 4.33876E-06 | None | None | None | None | N | None | 0 | 1.00043E-04 | None | 0 | 0 | None | 0 | 0 | 8.47745E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1287 | likely_benign | 0.1422 | benign | -0.011 | Destabilizing | 0.028 | N | 0.17 | neutral | N | 0.425982433 | None | None | N |
E/C | 0.7213 | likely_pathogenic | 0.747 | pathogenic | -0.261 | Destabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
E/D | 0.1046 | likely_benign | 0.1149 | benign | -0.261 | Destabilizing | 0.679 | D | 0.263 | neutral | N | 0.4273693 | None | None | N |
E/F | 0.6439 | likely_pathogenic | 0.6824 | pathogenic | -0.068 | Destabilizing | 0.98 | D | 0.384 | neutral | None | None | None | None | N |
E/G | 0.1186 | likely_benign | 0.1403 | benign | -0.122 | Destabilizing | 0.007 | N | 0.191 | neutral | N | 0.427889375 | None | None | N |
E/H | 0.3557 | ambiguous | 0.4001 | ambiguous | 0.584 | Stabilizing | 0.047 | N | 0.181 | neutral | None | None | None | None | N |
E/I | 0.2933 | likely_benign | 0.3163 | benign | 0.222 | Stabilizing | 0.98 | D | 0.413 | neutral | None | None | None | None | N |
E/K | 0.1035 | likely_benign | 0.1267 | benign | 0.35 | Stabilizing | 0.064 | N | 0.171 | neutral | N | 0.425982433 | None | None | N |
E/L | 0.3251 | likely_benign | 0.35 | ambiguous | 0.222 | Stabilizing | 0.872 | D | 0.393 | neutral | None | None | None | None | N |
E/M | 0.401 | ambiguous | 0.4195 | ambiguous | -0.063 | Destabilizing | 0.993 | D | 0.342 | neutral | None | None | None | None | N |
E/N | 0.2008 | likely_benign | 0.2319 | benign | 0.174 | Stabilizing | 0.872 | D | 0.221 | neutral | None | None | None | None | N |
E/P | 0.2566 | likely_benign | 0.2943 | benign | 0.161 | Stabilizing | 0.932 | D | 0.389 | neutral | None | None | None | None | N |
E/Q | 0.1258 | likely_benign | 0.1422 | benign | 0.17 | Stabilizing | 0.837 | D | 0.251 | neutral | N | 0.426675867 | None | None | N |
E/R | 0.1823 | likely_benign | 0.2164 | benign | 0.62 | Stabilizing | 0.021 | N | 0.183 | neutral | None | None | None | None | N |
E/S | 0.1404 | likely_benign | 0.1602 | benign | None | Stabilizing | 0.209 | N | 0.165 | neutral | None | None | None | None | N |
E/T | 0.1784 | likely_benign | 0.1982 | benign | 0.096 | Stabilizing | 0.773 | D | 0.355 | neutral | None | None | None | None | N |
E/V | 0.1915 | likely_benign | 0.2082 | benign | 0.161 | Stabilizing | 0.837 | D | 0.365 | neutral | N | 0.428062733 | None | None | N |
E/W | 0.7976 | likely_pathogenic | 0.8239 | pathogenic | -0.029 | Destabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
E/Y | 0.5042 | ambiguous | 0.5396 | ambiguous | 0.154 | Stabilizing | 0.96 | D | 0.391 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.