Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32709 | 98350;98351;98352 | chr2:178539940;178539939;178539938 | chr2:179404667;179404666;179404665 |
N2AB | 31068 | 93427;93428;93429 | chr2:178539940;178539939;178539938 | chr2:179404667;179404666;179404665 |
N2A | 30141 | 90646;90647;90648 | chr2:178539940;178539939;178539938 | chr2:179404667;179404666;179404665 |
N2B | 23644 | 71155;71156;71157 | chr2:178539940;178539939;178539938 | chr2:179404667;179404666;179404665 |
Novex-1 | 23769 | 71530;71531;71532 | chr2:178539940;178539939;178539938 | chr2:179404667;179404666;179404665 |
Novex-2 | 23836 | 71731;71732;71733 | chr2:178539940;178539939;178539938 | chr2:179404667;179404666;179404665 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs1372889503 | -0.121 | 0.175 | N | 0.367 | 0.176 | 0.379193981924 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2421 | likely_benign | 0.304 | benign | -0.055 | Destabilizing | 0.055 | N | 0.394 | neutral | None | None | None | None | I |
R/C | 0.1978 | likely_benign | 0.2323 | benign | -0.457 | Destabilizing | 0.958 | D | 0.293 | neutral | None | None | None | None | I |
R/D | 0.4163 | ambiguous | 0.4734 | ambiguous | -0.386 | Destabilizing | 0.22 | N | 0.393 | neutral | None | None | None | None | I |
R/E | 0.2481 | likely_benign | 0.2789 | benign | -0.3 | Destabilizing | 0.055 | N | 0.376 | neutral | None | None | None | None | I |
R/F | 0.472 | ambiguous | 0.5223 | ambiguous | -0.313 | Destabilizing | 0.667 | D | 0.321 | neutral | None | None | None | None | I |
R/G | 0.1744 | likely_benign | 0.2137 | benign | -0.241 | Destabilizing | 0.175 | N | 0.367 | neutral | N | 0.499498757 | None | None | I |
R/H | 0.1183 | likely_benign | 0.1269 | benign | -0.909 | Destabilizing | 0.667 | D | 0.336 | neutral | None | None | None | None | I |
R/I | 0.173 | likely_benign | 0.2108 | benign | 0.402 | Stabilizing | 0.003 | N | 0.323 | neutral | N | 0.499672115 | None | None | I |
R/K | 0.0858 | likely_benign | 0.0969 | benign | -0.231 | Destabilizing | None | N | 0.196 | neutral | N | 0.422806055 | None | None | I |
R/L | 0.1853 | likely_benign | 0.2185 | benign | 0.402 | Stabilizing | 0.055 | N | 0.333 | neutral | None | None | None | None | I |
R/M | 0.1923 | likely_benign | 0.2386 | benign | -0.216 | Destabilizing | 0.667 | D | 0.335 | neutral | None | None | None | None | I |
R/N | 0.314 | likely_benign | 0.3815 | ambiguous | -0.324 | Destabilizing | 0.22 | N | 0.344 | neutral | None | None | None | None | I |
R/P | 0.4037 | ambiguous | 0.4691 | ambiguous | 0.269 | Stabilizing | 0.667 | D | 0.369 | neutral | None | None | None | None | I |
R/Q | 0.1058 | likely_benign | 0.1154 | benign | -0.271 | Destabilizing | 0.011 | N | 0.261 | neutral | None | None | None | None | I |
R/S | 0.2829 | likely_benign | 0.3441 | ambiguous | -0.514 | Destabilizing | 0.096 | N | 0.371 | neutral | N | 0.479352771 | None | None | I |
R/T | 0.1462 | likely_benign | 0.1876 | benign | -0.288 | Destabilizing | 0.175 | N | 0.386 | neutral | N | 0.455438549 | None | None | I |
R/V | 0.2446 | likely_benign | 0.2913 | benign | 0.269 | Stabilizing | 0.055 | N | 0.318 | neutral | None | None | None | None | I |
R/W | 0.2209 | likely_benign | 0.2501 | benign | -0.482 | Destabilizing | 0.958 | D | 0.302 | neutral | None | None | None | None | I |
R/Y | 0.3556 | ambiguous | 0.3811 | ambiguous | -0.064 | Destabilizing | 0.859 | D | 0.352 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.