Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32712 | 98359;98360;98361 | chr2:178539931;178539930;178539929 | chr2:179404658;179404657;179404656 |
N2AB | 31071 | 93436;93437;93438 | chr2:178539931;178539930;178539929 | chr2:179404658;179404657;179404656 |
N2A | 30144 | 90655;90656;90657 | chr2:178539931;178539930;178539929 | chr2:179404658;179404657;179404656 |
N2B | 23647 | 71164;71165;71166 | chr2:178539931;178539930;178539929 | chr2:179404658;179404657;179404656 |
Novex-1 | 23772 | 71539;71540;71541 | chr2:178539931;178539930;178539929 | chr2:179404658;179404657;179404656 |
Novex-2 | 23839 | 71740;71741;71742 | chr2:178539931;178539930;178539929 | chr2:179404658;179404657;179404656 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1169770151 | -0.021 | 0.117 | N | 0.385 | 0.044 | 0.0954503805726 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/D | rs1169770151 | -0.021 | 0.117 | N | 0.385 | 0.044 | 0.0954503805726 | gnomAD-4.0.0 | 5.47444E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.1967E-06 | 0 | 0 |
E/Q | None | None | 0.997 | N | 0.679 | 0.304 | 0.151104730317 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1657 | likely_benign | 0.1639 | benign | -0.067 | Destabilizing | 0.977 | D | 0.707 | prob.neutral | N | 0.458768776 | None | None | N |
E/C | 0.8306 | likely_pathogenic | 0.8198 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
E/D | 0.0921 | likely_benign | 0.0906 | benign | -0.21 | Destabilizing | 0.117 | N | 0.385 | neutral | N | 0.371515151 | None | None | N |
E/F | 0.7799 | likely_pathogenic | 0.7686 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/G | 0.1485 | likely_benign | 0.1519 | benign | -0.204 | Destabilizing | 0.993 | D | 0.669 | neutral | N | 0.477354537 | None | None | N |
E/H | 0.4552 | ambiguous | 0.4467 | ambiguous | 0.426 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/I | 0.4981 | ambiguous | 0.4718 | ambiguous | 0.239 | Stabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
E/K | 0.1697 | likely_benign | 0.1766 | benign | 0.522 | Stabilizing | 0.977 | D | 0.677 | prob.neutral | N | 0.428328439 | None | None | N |
E/L | 0.4996 | ambiguous | 0.4801 | ambiguous | 0.239 | Stabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.5479 | ambiguous | 0.5255 | ambiguous | 0.117 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/N | 0.2161 | likely_benign | 0.2116 | benign | 0.245 | Stabilizing | 0.99 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/P | 0.5592 | ambiguous | 0.5567 | ambiguous | 0.156 | Stabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/Q | 0.17 | likely_benign | 0.1737 | benign | 0.266 | Stabilizing | 0.997 | D | 0.679 | prob.neutral | N | 0.409166675 | None | None | N |
E/R | 0.2896 | likely_benign | 0.2952 | benign | 0.715 | Stabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
E/S | 0.1936 | likely_benign | 0.194 | benign | 0.103 | Stabilizing | 0.983 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/T | 0.2311 | likely_benign | 0.2221 | benign | 0.223 | Stabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/V | 0.297 | likely_benign | 0.2818 | benign | 0.156 | Stabilizing | 0.997 | D | 0.75 | deleterious | N | 0.488744967 | None | None | N |
E/W | 0.8704 | likely_pathogenic | 0.8652 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Y | 0.6087 | likely_pathogenic | 0.5857 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.