Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32724 | 98395;98396;98397 | chr2:178539895;178539894;178539893 | chr2:179404622;179404621;179404620 |
N2AB | 31083 | 93472;93473;93474 | chr2:178539895;178539894;178539893 | chr2:179404622;179404621;179404620 |
N2A | 30156 | 90691;90692;90693 | chr2:178539895;178539894;178539893 | chr2:179404622;179404621;179404620 |
N2B | 23659 | 71200;71201;71202 | chr2:178539895;178539894;178539893 | chr2:179404622;179404621;179404620 |
Novex-1 | 23784 | 71575;71576;71577 | chr2:178539895;178539894;178539893 | chr2:179404622;179404621;179404620 |
Novex-2 | 23851 | 71776;71777;71778 | chr2:178539895;178539894;178539893 | chr2:179404622;179404621;179404620 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | D | 0.85 | 0.75 | 0.904252142976 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9409 | likely_pathogenic | 0.9287 | pathogenic | -1.588 | Destabilizing | 0.983 | D | 0.748 | deleterious | None | None | None | None | N |
L/C | 0.9019 | likely_pathogenic | 0.8763 | pathogenic | -1.286 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9983 | pathogenic | -2.537 | Highly Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
L/E | 0.9935 | likely_pathogenic | 0.9907 | pathogenic | -2.281 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
L/F | 0.4767 | ambiguous | 0.3951 | ambiguous | -1.134 | Destabilizing | 0.993 | D | 0.777 | deleterious | D | 0.534424981 | None | None | N |
L/G | 0.9901 | likely_pathogenic | 0.9881 | pathogenic | -2.036 | Highly Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
L/H | 0.9797 | likely_pathogenic | 0.9693 | pathogenic | -2.203 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.598271803 | None | None | N |
L/I | 0.1276 | likely_benign | 0.1057 | benign | -0.248 | Destabilizing | 0.235 | N | 0.412 | neutral | N | 0.492722129 | None | None | N |
L/K | 0.9868 | likely_pathogenic | 0.9815 | pathogenic | -1.424 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
L/M | 0.2357 | likely_benign | 0.1772 | benign | -0.633 | Destabilizing | 0.995 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/N | 0.992 | likely_pathogenic | 0.988 | pathogenic | -2.088 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
L/P | 0.9943 | likely_pathogenic | 0.9923 | pathogenic | -0.687 | Destabilizing | 0.999 | D | 0.85 | deleterious | D | 0.598271803 | None | None | N |
L/Q | 0.977 | likely_pathogenic | 0.9655 | pathogenic | -1.684 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/R | 0.9812 | likely_pathogenic | 0.9743 | pathogenic | -1.842 | Destabilizing | 0.999 | D | 0.835 | deleterious | D | 0.598271803 | None | None | N |
L/S | 0.9918 | likely_pathogenic | 0.9879 | pathogenic | -2.39 | Highly Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
L/T | 0.9697 | likely_pathogenic | 0.9586 | pathogenic | -1.991 | Destabilizing | 0.995 | D | 0.789 | deleterious | None | None | None | None | N |
L/V | 0.2558 | likely_benign | 0.2161 | benign | -0.687 | Destabilizing | 0.898 | D | 0.676 | prob.neutral | D | 0.532953173 | None | None | N |
L/W | 0.9315 | likely_pathogenic | 0.896 | pathogenic | -1.478 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/Y | 0.9331 | likely_pathogenic | 0.9008 | pathogenic | -1.241 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.