Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32725 | 98398;98399;98400 | chr2:178539892;178539891;178539890 | chr2:179404619;179404618;179404617 |
N2AB | 31084 | 93475;93476;93477 | chr2:178539892;178539891;178539890 | chr2:179404619;179404618;179404617 |
N2A | 30157 | 90694;90695;90696 | chr2:178539892;178539891;178539890 | chr2:179404619;179404618;179404617 |
N2B | 23660 | 71203;71204;71205 | chr2:178539892;178539891;178539890 | chr2:179404619;179404618;179404617 |
Novex-1 | 23785 | 71578;71579;71580 | chr2:178539892;178539891;178539890 | chr2:179404619;179404618;179404617 |
Novex-2 | 23852 | 71779;71780;71781 | chr2:178539892;178539891;178539890 | chr2:179404619;179404618;179404617 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.004 | N | 0.299 | 0.145 | 0.269558022972 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0876 | likely_benign | 0.0783 | benign | -0.867 | Destabilizing | 0.201 | N | 0.407 | neutral | N | 0.49725346 | None | None | I |
T/C | 0.3347 | likely_benign | 0.3073 | benign | -0.646 | Destabilizing | 0.992 | D | 0.515 | neutral | None | None | None | None | I |
T/D | 0.4322 | ambiguous | 0.4093 | ambiguous | -0.75 | Destabilizing | 0.447 | N | 0.459 | neutral | None | None | None | None | I |
T/E | 0.3511 | ambiguous | 0.3241 | benign | -0.614 | Destabilizing | 0.617 | D | 0.455 | neutral | None | None | None | None | I |
T/F | 0.2711 | likely_benign | 0.2729 | benign | -0.557 | Destabilizing | 0.972 | D | 0.584 | neutral | None | None | None | None | I |
T/G | 0.26 | likely_benign | 0.2336 | benign | -1.253 | Destabilizing | 0.25 | N | 0.507 | neutral | None | None | None | None | I |
T/H | 0.2393 | likely_benign | 0.2287 | benign | -1.372 | Destabilizing | 0.85 | D | 0.575 | neutral | None | None | None | None | I |
T/I | 0.2036 | likely_benign | 0.1666 | benign | 0.114 | Stabilizing | 0.896 | D | 0.513 | neutral | N | 0.483556231 | None | None | I |
T/K | 0.2518 | likely_benign | 0.2442 | benign | -0.717 | Destabilizing | 0.447 | N | 0.447 | neutral | None | None | None | None | I |
T/L | 0.1256 | likely_benign | 0.1165 | benign | 0.114 | Stabilizing | 0.617 | D | 0.455 | neutral | None | None | None | None | I |
T/M | 0.1088 | likely_benign | 0.107 | benign | 0.094 | Stabilizing | 0.992 | D | 0.515 | neutral | None | None | None | None | I |
T/N | 0.1239 | likely_benign | 0.119 | benign | -1.12 | Destabilizing | 0.004 | N | 0.299 | neutral | N | 0.472048371 | None | None | I |
T/P | 0.2055 | likely_benign | 0.1357 | benign | -0.179 | Destabilizing | 0.896 | D | 0.517 | neutral | N | 0.43714915 | None | None | I |
T/Q | 0.2319 | likely_benign | 0.2076 | benign | -0.977 | Destabilizing | 0.85 | D | 0.517 | neutral | None | None | None | None | I |
T/R | 0.1991 | likely_benign | 0.2018 | benign | -0.752 | Destabilizing | 0.85 | D | 0.516 | neutral | None | None | None | None | I |
T/S | 0.1068 | likely_benign | 0.1026 | benign | -1.38 | Destabilizing | 0.007 | N | 0.226 | neutral | N | 0.429759031 | None | None | I |
T/V | 0.1549 | likely_benign | 0.1355 | benign | -0.179 | Destabilizing | 0.617 | D | 0.391 | neutral | None | None | None | None | I |
T/W | 0.5772 | likely_pathogenic | 0.5836 | pathogenic | -0.655 | Destabilizing | 0.992 | D | 0.618 | neutral | None | None | None | None | I |
T/Y | 0.2681 | likely_benign | 0.2653 | benign | -0.332 | Destabilizing | 0.972 | D | 0.582 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.