Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32729 | 98410;98411;98412 | chr2:178539880;178539879;178539878 | chr2:179404607;179404606;179404605 |
N2AB | 31088 | 93487;93488;93489 | chr2:178539880;178539879;178539878 | chr2:179404607;179404606;179404605 |
N2A | 30161 | 90706;90707;90708 | chr2:178539880;178539879;178539878 | chr2:179404607;179404606;179404605 |
N2B | 23664 | 71215;71216;71217 | chr2:178539880;178539879;178539878 | chr2:179404607;179404606;179404605 |
Novex-1 | 23789 | 71590;71591;71592 | chr2:178539880;178539879;178539878 | chr2:179404607;179404606;179404605 |
Novex-2 | 23856 | 71791;71792;71793 | chr2:178539880;178539879;178539878 | chr2:179404607;179404606;179404605 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1368497531 | 0.099 | 0.018 | N | 0.254 | 0.115 | 0.307332253619 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1368497531 | 0.099 | 0.018 | N | 0.254 | 0.115 | 0.307332253619 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | I | None | 0 | 2.23624E-05 | None | 0 | 2.5194E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1368497531 | None | 0.722 | N | 0.507 | 0.284 | 0.29132392195 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5366 | ambiguous | 0.4803 | ambiguous | -0.067 | Destabilizing | 0.775 | D | 0.477 | neutral | None | None | None | None | I |
K/C | 0.7221 | likely_pathogenic | 0.6747 | pathogenic | -0.689 | Destabilizing | 0.996 | D | 0.566 | neutral | None | None | None | None | I |
K/D | 0.8721 | likely_pathogenic | 0.8492 | pathogenic | -0.379 | Destabilizing | 0.961 | D | 0.488 | neutral | None | None | None | None | I |
K/E | 0.3995 | ambiguous | 0.3632 | ambiguous | -0.39 | Destabilizing | 0.722 | D | 0.449 | neutral | N | 0.457020203 | None | None | I |
K/F | 0.8483 | likely_pathogenic | 0.8195 | pathogenic | -0.447 | Destabilizing | 0.923 | D | 0.557 | neutral | None | None | None | None | I |
K/G | 0.7209 | likely_pathogenic | 0.683 | pathogenic | -0.172 | Destabilizing | 0.775 | D | 0.491 | neutral | None | None | None | None | I |
K/H | 0.3589 | ambiguous | 0.3259 | benign | -0.195 | Destabilizing | 0.989 | D | 0.511 | neutral | None | None | None | None | I |
K/I | 0.4711 | ambiguous | 0.4341 | ambiguous | 0.126 | Stabilizing | 0.565 | D | 0.49 | neutral | N | 0.498869613 | None | None | I |
K/L | 0.5644 | likely_pathogenic | 0.5191 | ambiguous | 0.126 | Stabilizing | 0.415 | N | 0.488 | neutral | None | None | None | None | I |
K/M | 0.3678 | ambiguous | 0.3313 | benign | -0.29 | Destabilizing | 0.415 | N | 0.44 | neutral | None | None | None | None | I |
K/N | 0.6927 | likely_pathogenic | 0.6566 | pathogenic | -0.257 | Destabilizing | 0.901 | D | 0.455 | neutral | N | 0.510086684 | None | None | I |
K/P | 0.9768 | likely_pathogenic | 0.9804 | pathogenic | 0.083 | Stabilizing | 0.987 | D | 0.503 | neutral | None | None | None | None | I |
K/Q | 0.2106 | likely_benign | 0.1892 | benign | -0.359 | Destabilizing | 0.901 | D | 0.47 | neutral | N | 0.440341384 | None | None | I |
K/R | 0.0859 | likely_benign | 0.0873 | benign | -0.228 | Destabilizing | 0.018 | N | 0.254 | neutral | N | 0.457041633 | None | None | I |
K/S | 0.6078 | likely_pathogenic | 0.557 | ambiguous | -0.589 | Destabilizing | 0.775 | D | 0.466 | neutral | None | None | None | None | I |
K/T | 0.2502 | likely_benign | 0.215 | benign | -0.491 | Destabilizing | 0.722 | D | 0.507 | neutral | N | 0.422870344 | None | None | I |
K/V | 0.4383 | ambiguous | 0.4002 | ambiguous | 0.083 | Stabilizing | 0.044 | N | 0.353 | neutral | None | None | None | None | I |
K/W | 0.8117 | likely_pathogenic | 0.7876 | pathogenic | -0.574 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | I |
K/Y | 0.7634 | likely_pathogenic | 0.7354 | pathogenic | -0.228 | Destabilizing | 0.987 | D | 0.552 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.