Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3273 | 10042;10043;10044 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
N2AB | 3273 | 10042;10043;10044 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
N2A | 3273 | 10042;10043;10044 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
N2B | 3227 | 9904;9905;9906 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
Novex-1 | 3227 | 9904;9905;9906 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
Novex-2 | 3227 | 9904;9905;9906 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
Novex-3 | 3273 | 10042;10043;10044 | chr2:178764698;178764697;178764696 | chr2:179629425;179629424;179629423 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | rs2090039389 | None | 0.996 | D | 0.786 | 0.722 | 0.795880955708 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/N | rs2090039389 | None | 0.996 | D | 0.786 | 0.722 | 0.795880955708 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9079 | likely_pathogenic | 0.9731 | pathogenic | -2.7 | Highly Destabilizing | 0.944 | D | 0.673 | neutral | None | None | None | None | N |
Y/C | 0.4327 | ambiguous | 0.7016 | pathogenic | -1.238 | Destabilizing | 0.999 | D | 0.773 | deleterious | D | 0.697812385 | None | None | N |
Y/D | 0.9054 | likely_pathogenic | 0.9759 | pathogenic | -1.522 | Destabilizing | 0.996 | D | 0.793 | deleterious | D | 0.659822846 | None | None | N |
Y/E | 0.9244 | likely_pathogenic | 0.979 | pathogenic | -1.415 | Destabilizing | 0.997 | D | 0.764 | deleterious | None | None | None | None | N |
Y/F | 0.0986 | likely_benign | 0.1122 | benign | -1.139 | Destabilizing | 0.039 | N | 0.345 | neutral | N | 0.464187366 | None | None | N |
Y/G | 0.8533 | likely_pathogenic | 0.9467 | pathogenic | -3.029 | Highly Destabilizing | 0.992 | D | 0.754 | deleterious | None | None | None | None | N |
Y/H | 0.3202 | likely_benign | 0.5557 | ambiguous | -1.309 | Destabilizing | 0.996 | D | 0.73 | prob.delet. | D | 0.555169237 | None | None | N |
Y/I | 0.8287 | likely_pathogenic | 0.9365 | pathogenic | -1.675 | Destabilizing | 0.968 | D | 0.715 | prob.delet. | None | None | None | None | N |
Y/K | 0.8095 | likely_pathogenic | 0.9314 | pathogenic | -1.298 | Destabilizing | 0.992 | D | 0.765 | deleterious | None | None | None | None | N |
Y/L | 0.712 | likely_pathogenic | 0.8444 | pathogenic | -1.675 | Destabilizing | 0.895 | D | 0.522 | neutral | None | None | None | None | N |
Y/M | 0.8211 | likely_pathogenic | 0.9108 | pathogenic | -1.338 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
Y/N | 0.5888 | likely_pathogenic | 0.8146 | pathogenic | -1.584 | Destabilizing | 0.996 | D | 0.786 | deleterious | D | 0.586926347 | None | None | N |
Y/P | 0.9981 | likely_pathogenic | 0.9995 | pathogenic | -2.017 | Highly Destabilizing | 0.997 | D | 0.791 | deleterious | None | None | None | None | N |
Y/Q | 0.7801 | likely_pathogenic | 0.9291 | pathogenic | -1.574 | Destabilizing | 0.997 | D | 0.799 | deleterious | None | None | None | None | N |
Y/R | 0.6402 | likely_pathogenic | 0.8428 | pathogenic | -0.777 | Destabilizing | 0.992 | D | 0.786 | deleterious | None | None | None | None | N |
Y/S | 0.6631 | likely_pathogenic | 0.8731 | pathogenic | -2.178 | Highly Destabilizing | 0.989 | D | 0.753 | deleterious | N | 0.515236562 | None | None | N |
Y/T | 0.8547 | likely_pathogenic | 0.9522 | pathogenic | -1.977 | Destabilizing | 0.992 | D | 0.757 | deleterious | None | None | None | None | N |
Y/V | 0.7659 | likely_pathogenic | 0.9039 | pathogenic | -2.017 | Highly Destabilizing | 0.895 | D | 0.659 | neutral | None | None | None | None | N |
Y/W | 0.5423 | ambiguous | 0.6075 | pathogenic | -0.543 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.