Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32733 | 98422;98423;98424 | chr2:178539868;178539867;178539866 | chr2:179404595;179404594;179404593 |
N2AB | 31092 | 93499;93500;93501 | chr2:178539868;178539867;178539866 | chr2:179404595;179404594;179404593 |
N2A | 30165 | 90718;90719;90720 | chr2:178539868;178539867;178539866 | chr2:179404595;179404594;179404593 |
N2B | 23668 | 71227;71228;71229 | chr2:178539868;178539867;178539866 | chr2:179404595;179404594;179404593 |
Novex-1 | 23793 | 71602;71603;71604 | chr2:178539868;178539867;178539866 | chr2:179404595;179404594;179404593 |
Novex-2 | 23860 | 71803;71804;71805 | chr2:178539868;178539867;178539866 | chr2:179404595;179404594;179404593 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | None | N | 0.191 | 0.239 | 0.54173910141 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1839 | likely_benign | 0.2015 | benign | -1.321 | Destabilizing | 0.004 | N | 0.351 | neutral | None | None | None | None | I |
F/C | 0.193 | likely_benign | 0.2057 | benign | -0.428 | Destabilizing | 0.427 | N | 0.429 | neutral | N | 0.492615644 | None | None | I |
F/D | 0.5221 | ambiguous | 0.5273 | ambiguous | 0.372 | Stabilizing | 0.044 | N | 0.47 | neutral | None | None | None | None | I |
F/E | 0.5436 | ambiguous | 0.5441 | ambiguous | 0.376 | Stabilizing | 0.044 | N | 0.467 | neutral | None | None | None | None | I |
F/G | 0.4974 | ambiguous | 0.5119 | ambiguous | -1.558 | Destabilizing | 0.009 | N | 0.429 | neutral | None | None | None | None | I |
F/H | 0.3494 | ambiguous | 0.3533 | ambiguous | -0.06 | Destabilizing | 0.138 | N | 0.341 | neutral | None | None | None | None | I |
F/I | 0.076 | likely_benign | 0.0878 | benign | -0.677 | Destabilizing | None | N | 0.169 | neutral | N | 0.390451281 | None | None | I |
F/K | 0.4722 | ambiguous | 0.4816 | ambiguous | -0.412 | Destabilizing | 0.044 | N | 0.464 | neutral | None | None | None | None | I |
F/L | 0.428 | ambiguous | 0.4426 | ambiguous | -0.677 | Destabilizing | None | N | 0.171 | neutral | N | 0.388680413 | None | None | I |
F/M | 0.1968 | likely_benign | 0.2101 | benign | -0.52 | Destabilizing | 0.002 | N | 0.233 | neutral | None | None | None | None | I |
F/N | 0.235 | likely_benign | 0.2495 | benign | -0.334 | Destabilizing | 0.044 | N | 0.497 | neutral | None | None | None | None | I |
F/P | 0.5154 | ambiguous | 0.509 | ambiguous | -0.875 | Destabilizing | 0.085 | N | 0.471 | neutral | None | None | None | None | I |
F/Q | 0.4206 | ambiguous | 0.4313 | ambiguous | -0.406 | Destabilizing | 0.085 | N | 0.473 | neutral | None | None | None | None | I |
F/R | 0.4144 | ambiguous | 0.4369 | ambiguous | 0.118 | Stabilizing | 0.044 | N | 0.483 | neutral | None | None | None | None | I |
F/S | 0.1501 | likely_benign | 0.1626 | benign | -1.037 | Destabilizing | None | N | 0.191 | neutral | N | 0.424254424 | None | None | I |
F/T | 0.1768 | likely_benign | 0.1991 | benign | -0.943 | Destabilizing | 0.009 | N | 0.411 | neutral | None | None | None | None | I |
F/V | 0.0806 | likely_benign | 0.0908 | benign | -0.875 | Destabilizing | None | N | 0.305 | neutral | N | 0.415346939 | None | None | I |
F/W | 0.4679 | ambiguous | 0.4607 | ambiguous | -0.296 | Destabilizing | 0.245 | N | 0.279 | neutral | None | None | None | None | I |
F/Y | 0.1194 | likely_benign | 0.1275 | benign | -0.36 | Destabilizing | None | N | 0.165 | neutral | N | 0.492442286 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.