Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32760 | 98503;98504;98505 | chr2:178539787;178539786;178539785 | chr2:179404514;179404513;179404512 |
N2AB | 31119 | 93580;93581;93582 | chr2:178539787;178539786;178539785 | chr2:179404514;179404513;179404512 |
N2A | 30192 | 90799;90800;90801 | chr2:178539787;178539786;178539785 | chr2:179404514;179404513;179404512 |
N2B | 23695 | 71308;71309;71310 | chr2:178539787;178539786;178539785 | chr2:179404514;179404513;179404512 |
Novex-1 | 23820 | 71683;71684;71685 | chr2:178539787;178539786;178539785 | chr2:179404514;179404513;179404512 |
Novex-2 | 23887 | 71884;71885;71886 | chr2:178539787;178539786;178539785 | chr2:179404514;179404513;179404512 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1060500523 | -1.744 | 1.0 | N | 0.797 | 0.511 | 0.758559352513 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.1489E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1060500523 | -1.744 | 1.0 | N | 0.797 | 0.511 | 0.758559352513 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs1060500523 | -1.744 | 1.0 | N | 0.797 | 0.511 | 0.758559352513 | gnomAD-4.0.0 | 3.84332E-06 | None | None | None | None | N | None | 5.07528E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8877 | likely_pathogenic | 0.9091 | pathogenic | -2.642 | Highly Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
L/C | 0.9044 | likely_pathogenic | 0.9119 | pathogenic | -1.972 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.518 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/E | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -3.202 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/F | 0.6928 | likely_pathogenic | 0.6853 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.499973421 | None | None | N |
L/G | 0.9901 | likely_pathogenic | 0.9912 | pathogenic | -3.249 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/H | 0.9953 | likely_pathogenic | 0.9952 | pathogenic | -2.959 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.555655765 | None | None | N |
L/I | 0.2193 | likely_benign | 0.2162 | benign | -0.825 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.50801159 | None | None | N |
L/K | 0.9962 | likely_pathogenic | 0.9957 | pathogenic | -2.214 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/M | 0.2827 | likely_benign | 0.2979 | benign | -0.912 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9974 | pathogenic | -2.917 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -1.42 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.555655765 | None | None | N |
L/Q | 0.9938 | likely_pathogenic | 0.9932 | pathogenic | -2.589 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/R | 0.9924 | likely_pathogenic | 0.9918 | pathogenic | -2.224 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.555655765 | None | None | N |
L/S | 0.9957 | likely_pathogenic | 0.9961 | pathogenic | -3.486 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/T | 0.9761 | likely_pathogenic | 0.9771 | pathogenic | -3.0 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/V | 0.2841 | likely_benign | 0.2864 | benign | -1.42 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.512899889 | None | None | N |
L/W | 0.9763 | likely_pathogenic | 0.9761 | pathogenic | -2.104 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/Y | 0.9674 | likely_pathogenic | 0.9689 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.