Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3276098503;98504;98505 chr2:178539787;178539786;178539785chr2:179404514;179404513;179404512
N2AB3111993580;93581;93582 chr2:178539787;178539786;178539785chr2:179404514;179404513;179404512
N2A3019290799;90800;90801 chr2:178539787;178539786;178539785chr2:179404514;179404513;179404512
N2B2369571308;71309;71310 chr2:178539787;178539786;178539785chr2:179404514;179404513;179404512
Novex-12382071683;71684;71685 chr2:178539787;178539786;178539785chr2:179404514;179404513;179404512
Novex-22388771884;71885;71886 chr2:178539787;178539786;178539785chr2:179404514;179404513;179404512
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-155
  • Domain position: 53
  • Structural Position: 138
  • Q(SASA): 0.1204
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1060500523 -1.744 1.0 N 0.797 0.511 0.758559352513 gnomAD-2.1.1 3.19E-05 None None None None N None 1.1489E-04 0 None 0 0 None 0 None 0 0 0
L/F rs1060500523 -1.744 1.0 N 0.797 0.511 0.758559352513 gnomAD-3.1.2 1.31E-05 None None None None N None 4.83E-05 0 0 0 0 None 0 0 0 0 0
L/F rs1060500523 -1.744 1.0 N 0.797 0.511 0.758559352513 gnomAD-4.0.0 3.84332E-06 None None None None N None 5.07528E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8877 likely_pathogenic 0.9091 pathogenic -2.642 Highly Destabilizing 0.999 D 0.777 deleterious None None None None N
L/C 0.9044 likely_pathogenic 0.9119 pathogenic -1.972 Destabilizing 1.0 D 0.856 deleterious None None None None N
L/D 0.9996 likely_pathogenic 0.9996 pathogenic -3.518 Highly Destabilizing 1.0 D 0.896 deleterious None None None None N
L/E 0.9979 likely_pathogenic 0.9978 pathogenic -3.202 Highly Destabilizing 1.0 D 0.879 deleterious None None None None N
L/F 0.6928 likely_pathogenic 0.6853 pathogenic -1.648 Destabilizing 1.0 D 0.797 deleterious N 0.499973421 None None N
L/G 0.9901 likely_pathogenic 0.9912 pathogenic -3.249 Highly Destabilizing 1.0 D 0.871 deleterious None None None None N
L/H 0.9953 likely_pathogenic 0.9952 pathogenic -2.959 Highly Destabilizing 1.0 D 0.881 deleterious D 0.555655765 None None N
L/I 0.2193 likely_benign 0.2162 benign -0.825 Destabilizing 0.999 D 0.649 neutral N 0.50801159 None None N
L/K 0.9962 likely_pathogenic 0.9957 pathogenic -2.214 Highly Destabilizing 1.0 D 0.877 deleterious None None None None N
L/M 0.2827 likely_benign 0.2979 benign -0.912 Destabilizing 1.0 D 0.783 deleterious None None None None N
L/N 0.9976 likely_pathogenic 0.9974 pathogenic -2.917 Highly Destabilizing 1.0 D 0.896 deleterious None None None None N
L/P 0.9991 likely_pathogenic 0.9989 pathogenic -1.42 Destabilizing 1.0 D 0.894 deleterious D 0.555655765 None None N
L/Q 0.9938 likely_pathogenic 0.9932 pathogenic -2.589 Highly Destabilizing 1.0 D 0.899 deleterious None None None None N
L/R 0.9924 likely_pathogenic 0.9918 pathogenic -2.224 Highly Destabilizing 1.0 D 0.885 deleterious D 0.555655765 None None N
L/S 0.9957 likely_pathogenic 0.9961 pathogenic -3.486 Highly Destabilizing 1.0 D 0.875 deleterious None None None None N
L/T 0.9761 likely_pathogenic 0.9771 pathogenic -3.0 Highly Destabilizing 1.0 D 0.836 deleterious None None None None N
L/V 0.2841 likely_benign 0.2864 benign -1.42 Destabilizing 0.999 D 0.649 neutral N 0.512899889 None None N
L/W 0.9763 likely_pathogenic 0.9761 pathogenic -2.104 Highly Destabilizing 1.0 D 0.861 deleterious None None None None N
L/Y 0.9674 likely_pathogenic 0.9689 pathogenic -1.819 Destabilizing 1.0 D 0.856 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.