Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32764 | 98515;98516;98517 | chr2:178539775;178539774;178539773 | chr2:179404502;179404501;179404500 |
N2AB | 31123 | 93592;93593;93594 | chr2:178539775;178539774;178539773 | chr2:179404502;179404501;179404500 |
N2A | 30196 | 90811;90812;90813 | chr2:178539775;178539774;178539773 | chr2:179404502;179404501;179404500 |
N2B | 23699 | 71320;71321;71322 | chr2:178539775;178539774;178539773 | chr2:179404502;179404501;179404500 |
Novex-1 | 23824 | 71695;71696;71697 | chr2:178539775;178539774;178539773 | chr2:179404502;179404501;179404500 |
Novex-2 | 23891 | 71896;71897;71898 | chr2:178539775;178539774;178539773 | chr2:179404502;179404501;179404500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | -0.226 | 0.939 | N | 0.551 | 0.242 | 0.239305524855 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/A | None | -0.226 | 0.939 | N | 0.551 | 0.242 | 0.239305524855 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | None | -0.226 | 0.939 | N | 0.551 | 0.242 | 0.239305524855 | gnomAD-4.0.0 | 5.12407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.57213E-06 | 0 | 0 |
E/G | rs755276825 | -0.563 | 0.939 | N | 0.545 | 0.292 | 0.251116650651 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11421E-04 | None | 0 | None | 0 | 0 | 0 |
E/G | rs755276825 | -0.563 | 0.939 | N | 0.545 | 0.292 | 0.251116650651 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92827E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs755276825 | -0.563 | 0.939 | N | 0.545 | 0.292 | 0.251116650651 | gnomAD-4.0.0 | 3.84305E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.27273E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs781604869 | 0.663 | 0.939 | N | 0.505 | 0.258 | 0.190952846119 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/K | rs781604869 | 0.663 | 0.939 | N | 0.505 | 0.258 | 0.190952846119 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs781604869 | 0.663 | 0.939 | N | 0.505 | 0.258 | 0.190952846119 | gnomAD-4.0.0 | 7.6862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43578E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.166 | likely_benign | 0.1756 | benign | -0.167 | Destabilizing | 0.939 | D | 0.551 | neutral | N | 0.459075421 | None | None | N |
E/C | 0.8381 | likely_pathogenic | 0.8588 | pathogenic | 0.08 | Stabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
E/D | 0.088 | likely_benign | 0.0918 | benign | -0.171 | Destabilizing | 0.02 | N | 0.248 | neutral | N | 0.388673973 | None | None | N |
E/F | 0.78 | likely_pathogenic | 0.7834 | pathogenic | -0.172 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/G | 0.1294 | likely_benign | 0.1333 | benign | -0.328 | Destabilizing | 0.939 | D | 0.545 | neutral | N | 0.430811384 | None | None | N |
E/H | 0.525 | ambiguous | 0.5414 | ambiguous | 0.139 | Stabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | N |
E/I | 0.5656 | likely_pathogenic | 0.5828 | pathogenic | 0.21 | Stabilizing | 0.993 | D | 0.754 | deleterious | None | None | None | None | N |
E/K | 0.2604 | likely_benign | 0.261 | benign | 0.488 | Stabilizing | 0.939 | D | 0.505 | neutral | N | 0.429232516 | None | None | N |
E/L | 0.5266 | ambiguous | 0.5431 | ambiguous | 0.21 | Stabilizing | 0.993 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/M | 0.5431 | ambiguous | 0.5489 | ambiguous | 0.23 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/N | 0.175 | likely_benign | 0.1761 | benign | 0.267 | Stabilizing | 0.973 | D | 0.566 | neutral | None | None | None | None | N |
E/P | 0.8423 | likely_pathogenic | 0.8509 | pathogenic | 0.104 | Stabilizing | 0.993 | D | 0.651 | neutral | None | None | None | None | N |
E/Q | 0.1844 | likely_benign | 0.188 | benign | 0.29 | Stabilizing | 0.991 | D | 0.573 | neutral | N | 0.457363267 | None | None | N |
E/R | 0.3934 | ambiguous | 0.3933 | ambiguous | 0.637 | Stabilizing | 0.993 | D | 0.615 | neutral | None | None | None | None | N |
E/S | 0.2037 | likely_benign | 0.2077 | benign | 0.1 | Stabilizing | 0.953 | D | 0.508 | neutral | None | None | None | None | N |
E/T | 0.267 | likely_benign | 0.2778 | benign | 0.233 | Stabilizing | 0.986 | D | 0.59 | neutral | None | None | None | None | N |
E/V | 0.3345 | likely_benign | 0.3512 | ambiguous | 0.104 | Stabilizing | 0.991 | D | 0.696 | prob.neutral | N | 0.482568356 | None | None | N |
E/W | 0.9045 | likely_pathogenic | 0.9152 | pathogenic | -0.088 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
E/Y | 0.5917 | likely_pathogenic | 0.6057 | pathogenic | 0.062 | Stabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.