Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32766 | 98521;98522;98523 | chr2:178539769;178539768;178539767 | chr2:179404496;179404495;179404494 |
N2AB | 31125 | 93598;93599;93600 | chr2:178539769;178539768;178539767 | chr2:179404496;179404495;179404494 |
N2A | 30198 | 90817;90818;90819 | chr2:178539769;178539768;178539767 | chr2:179404496;179404495;179404494 |
N2B | 23701 | 71326;71327;71328 | chr2:178539769;178539768;178539767 | chr2:179404496;179404495;179404494 |
Novex-1 | 23826 | 71701;71702;71703 | chr2:178539769;178539768;178539767 | chr2:179404496;179404495;179404494 |
Novex-2 | 23893 | 71902;71903;71904 | chr2:178539769;178539768;178539767 | chr2:179404496;179404495;179404494 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs727504449 | -0.386 | 0.627 | N | 0.423 | 0.319 | 0.627368885312 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1243 | likely_benign | 0.1174 | benign | -0.385 | Destabilizing | 0.09 | N | 0.366 | neutral | N | 0.472067013 | None | None | N |
D/C | 0.4004 | ambiguous | 0.3702 | ambiguous | 0.067 | Stabilizing | 0.944 | D | 0.422 | neutral | None | None | None | None | N |
D/E | 0.104 | likely_benign | 0.1064 | benign | -0.611 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.400569488 | None | None | N |
D/F | 0.3854 | ambiguous | 0.3684 | ambiguous | -0.444 | Destabilizing | 0.69 | D | 0.423 | neutral | None | None | None | None | N |
D/G | 0.1388 | likely_benign | 0.1324 | benign | -0.64 | Destabilizing | 0.324 | N | 0.319 | neutral | N | 0.507950456 | None | None | N |
D/H | 0.1661 | likely_benign | 0.1569 | benign | -0.655 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.466815909 | None | None | N |
D/I | 0.2034 | likely_benign | 0.191 | benign | 0.251 | Stabilizing | 0.098 | N | 0.411 | neutral | None | None | None | None | N |
D/K | 0.1931 | likely_benign | 0.1885 | benign | 0.015 | Stabilizing | 0.241 | N | 0.305 | neutral | None | None | None | None | N |
D/L | 0.1947 | likely_benign | 0.1831 | benign | 0.251 | Stabilizing | 0.241 | N | 0.391 | neutral | None | None | None | None | N |
D/M | 0.3684 | ambiguous | 0.3375 | benign | 0.656 | Stabilizing | 0.69 | D | 0.415 | neutral | None | None | None | None | N |
D/N | 0.0758 | likely_benign | 0.0737 | benign | -0.279 | Destabilizing | 0.324 | N | 0.243 | neutral | N | 0.445939205 | None | None | N |
D/P | 0.8051 | likely_pathogenic | 0.7955 | pathogenic | 0.063 | Stabilizing | 0.818 | D | 0.351 | neutral | None | None | None | None | N |
D/Q | 0.1747 | likely_benign | 0.1686 | benign | -0.227 | Destabilizing | 0.241 | N | 0.32 | neutral | None | None | None | None | N |
D/R | 0.2351 | likely_benign | 0.2247 | benign | 0.063 | Stabilizing | 0.69 | D | 0.378 | neutral | None | None | None | None | N |
D/S | 0.0897 | likely_benign | 0.0846 | benign | -0.424 | Destabilizing | 0.241 | N | 0.218 | neutral | None | None | None | None | N |
D/T | 0.1459 | likely_benign | 0.1267 | benign | -0.227 | Destabilizing | 0.241 | N | 0.295 | neutral | None | None | None | None | N |
D/V | 0.126 | likely_benign | 0.1209 | benign | 0.063 | Stabilizing | 0.001 | N | 0.289 | neutral | N | 0.461428732 | None | None | N |
D/W | 0.7582 | likely_pathogenic | 0.7484 | pathogenic | -0.366 | Destabilizing | 0.981 | D | 0.527 | neutral | None | None | None | None | N |
D/Y | 0.177 | likely_benign | 0.1717 | benign | -0.226 | Destabilizing | 0.627 | D | 0.423 | neutral | N | 0.500659124 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.