Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3277 | 10054;10055;10056 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
N2AB | 3277 | 10054;10055;10056 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
N2A | 3277 | 10054;10055;10056 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
N2B | 3231 | 9916;9917;9918 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
Novex-1 | 3231 | 9916;9917;9918 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
Novex-2 | 3231 | 9916;9917;9918 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
Novex-3 | 3277 | 10054;10055;10056 | chr2:178764686;178764685;178764684 | chr2:179629413;179629412;179629411 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.625 | N | 0.404 | 0.313 | 0.300784259202 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.371 | ambiguous | 0.4357 | ambiguous | -0.279 | Destabilizing | 0.525 | D | 0.387 | neutral | None | None | None | None | N |
Q/C | 0.8319 | likely_pathogenic | 0.9082 | pathogenic | 0.01 | Stabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
Q/D | 0.6155 | likely_pathogenic | 0.6994 | pathogenic | 0.132 | Stabilizing | 0.842 | D | 0.368 | neutral | None | None | None | None | N |
Q/E | 0.1333 | likely_benign | 0.1455 | benign | 0.167 | Stabilizing | 0.625 | D | 0.404 | neutral | N | 0.477922482 | None | None | N |
Q/F | 0.8501 | likely_pathogenic | 0.9024 | pathogenic | -0.254 | Destabilizing | 0.974 | D | 0.476 | neutral | None | None | None | None | N |
Q/G | 0.4987 | ambiguous | 0.5989 | pathogenic | -0.537 | Destabilizing | 0.842 | D | 0.424 | neutral | None | None | None | None | N |
Q/H | 0.3565 | ambiguous | 0.4625 | ambiguous | -0.259 | Destabilizing | 0.966 | D | 0.326 | neutral | N | 0.51589192 | None | None | N |
Q/I | 0.5299 | ambiguous | 0.6174 | pathogenic | 0.331 | Stabilizing | 0.949 | D | 0.476 | neutral | None | None | None | None | N |
Q/K | 0.1605 | likely_benign | 0.2062 | benign | -0.026 | Destabilizing | 0.454 | N | 0.436 | neutral | N | 0.495149577 | None | None | N |
Q/L | 0.2288 | likely_benign | 0.3004 | benign | 0.331 | Stabilizing | 0.669 | D | 0.417 | neutral | N | 0.508828003 | None | None | N |
Q/M | 0.4717 | ambiguous | 0.5061 | ambiguous | 0.365 | Stabilizing | 0.991 | D | 0.327 | neutral | None | None | None | None | N |
Q/N | 0.3709 | ambiguous | 0.4334 | ambiguous | -0.538 | Destabilizing | 0.842 | D | 0.357 | neutral | None | None | None | None | N |
Q/P | 0.7678 | likely_pathogenic | 0.9039 | pathogenic | 0.158 | Stabilizing | 0.966 | D | 0.351 | neutral | D | 0.637696358 | None | None | N |
Q/R | 0.2026 | likely_benign | 0.2689 | benign | 0.101 | Stabilizing | 0.012 | N | 0.245 | neutral | N | 0.499980229 | None | None | N |
Q/S | 0.4417 | ambiguous | 0.4944 | ambiguous | -0.558 | Destabilizing | 0.728 | D | 0.379 | neutral | None | None | None | None | N |
Q/T | 0.3109 | likely_benign | 0.3564 | ambiguous | -0.347 | Destabilizing | 0.067 | N | 0.257 | neutral | None | None | None | None | N |
Q/V | 0.3952 | ambiguous | 0.4558 | ambiguous | 0.158 | Stabilizing | 0.728 | D | 0.431 | neutral | None | None | None | None | N |
Q/W | 0.8451 | likely_pathogenic | 0.9144 | pathogenic | -0.219 | Destabilizing | 0.998 | D | 0.51 | neutral | None | None | None | None | N |
Q/Y | 0.6708 | likely_pathogenic | 0.7718 | pathogenic | 0.033 | Stabilizing | 0.991 | D | 0.368 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.