Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32772 | 98539;98540;98541 | chr2:178539751;178539750;178539749 | chr2:179404478;179404477;179404476 |
N2AB | 31131 | 93616;93617;93618 | chr2:178539751;178539750;178539749 | chr2:179404478;179404477;179404476 |
N2A | 30204 | 90835;90836;90837 | chr2:178539751;178539750;178539749 | chr2:179404478;179404477;179404476 |
N2B | 23707 | 71344;71345;71346 | chr2:178539751;178539750;178539749 | chr2:179404478;179404477;179404476 |
Novex-1 | 23832 | 71719;71720;71721 | chr2:178539751;178539750;178539749 | chr2:179404478;179404477;179404476 |
Novex-2 | 23899 | 71920;71921;71922 | chr2:178539751;178539750;178539749 | chr2:179404478;179404477;179404476 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1163729764 | 0.099 | 0.002 | N | 0.32 | 0.124 | 0.331876078066 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1163729764 | 0.099 | 0.002 | N | 0.32 | 0.124 | 0.331876078066 | gnomAD-4.0.0 | 4.77359E-06 | None | None | None | None | N | None | 0 | 4.57331E-05 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.11 | likely_benign | 0.1303 | benign | -1.144 | Destabilizing | 0.055 | N | 0.537 | neutral | N | 0.516953941 | None | None | N |
T/C | 0.3756 | ambiguous | 0.4462 | ambiguous | -0.759 | Destabilizing | 0.968 | D | 0.652 | neutral | None | None | None | None | N |
T/D | 0.5185 | ambiguous | 0.6032 | pathogenic | -0.668 | Destabilizing | 0.157 | N | 0.585 | neutral | None | None | None | None | N |
T/E | 0.4381 | ambiguous | 0.5323 | ambiguous | -0.575 | Destabilizing | 0.272 | N | 0.582 | neutral | None | None | None | None | N |
T/F | 0.2786 | likely_benign | 0.3519 | ambiguous | -0.962 | Destabilizing | 0.567 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/G | 0.3948 | ambiguous | 0.4546 | ambiguous | -1.488 | Destabilizing | 0.157 | N | 0.579 | neutral | None | None | None | None | N |
T/H | 0.3057 | likely_benign | 0.3834 | ambiguous | -1.627 | Destabilizing | 0.832 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/I | 0.1248 | likely_benign | 0.1499 | benign | -0.284 | Destabilizing | 0.002 | N | 0.32 | neutral | N | 0.499618974 | None | None | N |
T/K | 0.2588 | likely_benign | 0.3318 | benign | -0.735 | Destabilizing | 0.157 | N | 0.584 | neutral | None | None | None | None | N |
T/L | 0.1051 | likely_benign | 0.127 | benign | -0.284 | Destabilizing | 0.06 | N | 0.565 | neutral | None | None | None | None | N |
T/M | 0.1024 | likely_benign | 0.1161 | benign | -0.059 | Destabilizing | 0.832 | D | 0.644 | neutral | None | None | None | None | N |
T/N | 0.1461 | likely_benign | 0.173 | benign | -0.99 | Destabilizing | 0.002 | N | 0.249 | neutral | N | 0.499792332 | None | None | N |
T/P | 0.281 | likely_benign | 0.3232 | benign | -0.538 | Destabilizing | 0.667 | D | 0.645 | neutral | N | 0.510393328 | None | None | N |
T/Q | 0.2791 | likely_benign | 0.3451 | ambiguous | -1.01 | Destabilizing | 0.567 | D | 0.655 | neutral | None | None | None | None | N |
T/R | 0.2052 | likely_benign | 0.2684 | benign | -0.658 | Destabilizing | 0.567 | D | 0.644 | neutral | None | None | None | None | N |
T/S | 0.1569 | likely_benign | 0.1875 | benign | -1.318 | Destabilizing | 0.004 | N | 0.279 | neutral | N | 0.502061847 | None | None | N |
T/V | 0.1211 | likely_benign | 0.1398 | benign | -0.538 | Destabilizing | 0.06 | N | 0.523 | neutral | None | None | None | None | N |
T/W | 0.5872 | likely_pathogenic | 0.6771 | pathogenic | -0.916 | Destabilizing | 0.968 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/Y | 0.2716 | likely_benign | 0.3288 | benign | -0.651 | Destabilizing | 0.726 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.