Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32773 | 98542;98543;98544 | chr2:178539748;178539747;178539746 | chr2:179404475;179404474;179404473 |
N2AB | 31132 | 93619;93620;93621 | chr2:178539748;178539747;178539746 | chr2:179404475;179404474;179404473 |
N2A | 30205 | 90838;90839;90840 | chr2:178539748;178539747;178539746 | chr2:179404475;179404474;179404473 |
N2B | 23708 | 71347;71348;71349 | chr2:178539748;178539747;178539746 | chr2:179404475;179404474;179404473 |
Novex-1 | 23833 | 71722;71723;71724 | chr2:178539748;178539747;178539746 | chr2:179404475;179404474;179404473 |
Novex-2 | 23900 | 71923;71924;71925 | chr2:178539748;178539747;178539746 | chr2:179404475;179404474;179404473 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1693456839 | None | 1.0 | D | 0.818 | 0.72 | 0.787935859653 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs1693456839 | None | 1.0 | D | 0.818 | 0.72 | 0.787935859653 | gnomAD-4.0.0 | 6.57341E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9975 | likely_pathogenic | 0.9975 | pathogenic | -2.263 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Y/C | 0.9502 | likely_pathogenic | 0.9467 | pathogenic | -1.753 | Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.62718879 | None | None | N |
Y/D | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -2.978 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.62718879 | None | None | N |
Y/E | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -2.73 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/F | 0.2212 | likely_benign | 0.1747 | benign | -0.909 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.579696836 | None | None | N |
Y/G | 0.9959 | likely_pathogenic | 0.9963 | pathogenic | -2.711 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/H | 0.9842 | likely_pathogenic | 0.9827 | pathogenic | -2.335 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.626986986 | None | None | N |
Y/I | 0.9631 | likely_pathogenic | 0.963 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Y/K | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.9 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/L | 0.9296 | likely_pathogenic | 0.9353 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
Y/M | 0.9842 | likely_pathogenic | 0.9826 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Y/N | 0.9945 | likely_pathogenic | 0.9947 | pathogenic | -2.812 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.62718879 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Y/Q | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -2.34 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Y/R | 0.9963 | likely_pathogenic | 0.9964 | pathogenic | -2.238 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/S | 0.9945 | likely_pathogenic | 0.9947 | pathogenic | -3.086 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.62718879 | None | None | N |
Y/T | 0.9974 | likely_pathogenic | 0.9976 | pathogenic | -2.687 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/V | 0.9415 | likely_pathogenic | 0.9414 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Y/W | 0.7167 | likely_pathogenic | 0.6932 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.