Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32775 | 98548;98549;98550 | chr2:178539742;178539741;178539740 | chr2:179404469;179404468;179404467 |
N2AB | 31134 | 93625;93626;93627 | chr2:178539742;178539741;178539740 | chr2:179404469;179404468;179404467 |
N2A | 30207 | 90844;90845;90846 | chr2:178539742;178539741;178539740 | chr2:179404469;179404468;179404467 |
N2B | 23710 | 71353;71354;71355 | chr2:178539742;178539741;178539740 | chr2:179404469;179404468;179404467 |
Novex-1 | 23835 | 71728;71729;71730 | chr2:178539742;178539741;178539740 | chr2:179404469;179404468;179404467 |
Novex-2 | 23902 | 71929;71930;71931 | chr2:178539742;178539741;178539740 | chr2:179404469;179404468;179404467 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 1.0 | N | 0.815 | 0.259 | 0.315903272564 | gnomAD-4.0.0 | 6.84202E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8533 | likely_pathogenic | 0.8662 | pathogenic | -2.484 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
L/C | 0.8011 | likely_pathogenic | 0.8118 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -2.346 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/F | 0.686 | likely_pathogenic | 0.709 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/G | 0.985 | likely_pathogenic | 0.9867 | pathogenic | -3.053 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/H | 0.993 | likely_pathogenic | 0.9935 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/I | 0.1675 | likely_benign | 0.1729 | benign | -0.838 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
L/K | 0.9962 | likely_pathogenic | 0.9959 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/M | 0.2751 | likely_benign | 0.28 | benign | -0.772 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.502751627 | None | None | N |
L/N | 0.9969 | likely_pathogenic | 0.9969 | pathogenic | -2.19 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/P | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.484876413 | None | None | N |
L/Q | 0.9901 | likely_pathogenic | 0.9899 | pathogenic | -2.03 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.484876413 | None | None | N |
L/R | 0.9909 | likely_pathogenic | 0.9908 | pathogenic | -1.612 | Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.484876413 | None | None | N |
L/S | 0.9908 | likely_pathogenic | 0.9924 | pathogenic | -2.942 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/T | 0.9406 | likely_pathogenic | 0.9504 | pathogenic | -2.545 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/V | 0.1743 | likely_benign | 0.1988 | benign | -1.367 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.45840063 | None | None | N |
L/W | 0.9838 | likely_pathogenic | 0.9864 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/Y | 0.9782 | likely_pathogenic | 0.9801 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.