Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32778 | 98557;98558;98559 | chr2:178539733;178539732;178539731 | chr2:179404460;179404459;179404458 |
N2AB | 31137 | 93634;93635;93636 | chr2:178539733;178539732;178539731 | chr2:179404460;179404459;179404458 |
N2A | 30210 | 90853;90854;90855 | chr2:178539733;178539732;178539731 | chr2:179404460;179404459;179404458 |
N2B | 23713 | 71362;71363;71364 | chr2:178539733;178539732;178539731 | chr2:179404460;179404459;179404458 |
Novex-1 | 23838 | 71737;71738;71739 | chr2:178539733;178539732;178539731 | chr2:179404460;179404459;179404458 |
Novex-2 | 23905 | 71938;71939;71940 | chr2:178539733;178539732;178539731 | chr2:179404460;179404459;179404458 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs771233778 | -0.416 | 0.067 | N | 0.328 | 0.264 | 0.245660935333 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs771233778 | -0.416 | 0.067 | N | 0.328 | 0.264 | 0.245660935333 | gnomAD-4.0.0 | 4.77374E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5463 | ambiguous | 0.5892 | pathogenic | -0.869 | Destabilizing | 0.919 | D | 0.589 | neutral | D | 0.534963699 | None | None | I |
E/C | 0.9591 | likely_pathogenic | 0.9662 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
E/D | 0.5768 | likely_pathogenic | 0.5997 | pathogenic | -0.8 | Destabilizing | 0.958 | D | 0.457 | neutral | N | 0.484606827 | None | None | I |
E/F | 0.9646 | likely_pathogenic | 0.9708 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
E/G | 0.6407 | likely_pathogenic | 0.7039 | pathogenic | -1.158 | Destabilizing | 0.988 | D | 0.707 | prob.neutral | N | 0.48553188 | None | None | I |
E/H | 0.8533 | likely_pathogenic | 0.8713 | pathogenic | -0.713 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/I | 0.7939 | likely_pathogenic | 0.8158 | pathogenic | -0.105 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | I |
E/K | 0.5833 | likely_pathogenic | 0.6307 | pathogenic | -0.165 | Destabilizing | 0.067 | N | 0.328 | neutral | N | 0.500176335 | None | None | I |
E/L | 0.8621 | likely_pathogenic | 0.8808 | pathogenic | -0.105 | Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | I |
E/M | 0.8273 | likely_pathogenic | 0.8477 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
E/N | 0.7816 | likely_pathogenic | 0.8047 | pathogenic | -0.6 | Destabilizing | 0.991 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/P | 0.9972 | likely_pathogenic | 0.9977 | pathogenic | -0.339 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/Q | 0.2904 | likely_benign | 0.3076 | benign | -0.534 | Destabilizing | 0.958 | D | 0.619 | neutral | N | 0.52032232 | None | None | I |
E/R | 0.7237 | likely_pathogenic | 0.7602 | pathogenic | 0.011 | Stabilizing | 0.982 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/S | 0.5884 | likely_pathogenic | 0.6245 | pathogenic | -0.83 | Destabilizing | 0.968 | D | 0.623 | neutral | None | None | None | None | I |
E/T | 0.5725 | likely_pathogenic | 0.6111 | pathogenic | -0.587 | Destabilizing | 0.991 | D | 0.673 | neutral | None | None | None | None | I |
E/V | 0.6033 | likely_pathogenic | 0.6395 | pathogenic | -0.339 | Destabilizing | 0.988 | D | 0.763 | deleterious | N | 0.516628654 | None | None | I |
E/W | 0.9818 | likely_pathogenic | 0.9857 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
E/Y | 0.9388 | likely_pathogenic | 0.9503 | pathogenic | -0.307 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.