Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32787 | 98584;98585;98586 | chr2:178539706;178539705;178539704 | chr2:179404433;179404432;179404431 |
N2AB | 31146 | 93661;93662;93663 | chr2:178539706;178539705;178539704 | chr2:179404433;179404432;179404431 |
N2A | 30219 | 90880;90881;90882 | chr2:178539706;178539705;178539704 | chr2:179404433;179404432;179404431 |
N2B | 23722 | 71389;71390;71391 | chr2:178539706;178539705;178539704 | chr2:179404433;179404432;179404431 |
Novex-1 | 23847 | 71764;71765;71766 | chr2:178539706;178539705;178539704 | chr2:179404433;179404432;179404431 |
Novex-2 | 23914 | 71965;71966;71967 | chr2:178539706;178539705;178539704 | chr2:179404433;179404432;179404431 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1419941913 | None | 1.0 | N | 0.795 | 0.482 | 0.66614110018 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs1419941913 | None | 1.0 | N | 0.795 | 0.482 | 0.66614110018 | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | I | None | 0 | 6.54536E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/F | None | None | 0.999 | N | 0.581 | 0.465 | 0.568962582336 | gnomAD-4.0.0 | 3.18253E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.3717 | ambiguous | 0.4484 | ambiguous | -0.806 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
Y/C | 0.1501 | likely_benign | 0.183 | benign | 0.025 | Stabilizing | 1.0 | D | 0.795 | deleterious | N | 0.505102152 | None | None | I |
Y/D | 0.3784 | ambiguous | 0.4783 | ambiguous | 0.829 | Stabilizing | 1.0 | D | 0.776 | deleterious | N | 0.39256608 | None | None | I |
Y/E | 0.6691 | likely_pathogenic | 0.7609 | pathogenic | 0.821 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
Y/F | 0.1091 | likely_benign | 0.1128 | benign | -0.355 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.421870267 | None | None | I |
Y/G | 0.349 | ambiguous | 0.4216 | ambiguous | -1.013 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
Y/H | 0.2102 | likely_benign | 0.2643 | benign | 0.119 | Stabilizing | 1.0 | D | 0.741 | deleterious | N | 0.451883742 | None | None | I |
Y/I | 0.5117 | ambiguous | 0.5816 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
Y/K | 0.5678 | likely_pathogenic | 0.6751 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
Y/L | 0.4725 | ambiguous | 0.5216 | ambiguous | -0.272 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
Y/M | 0.6036 | likely_pathogenic | 0.65 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
Y/N | 0.1715 | likely_benign | 0.218 | benign | -0.111 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.419483322 | None | None | I |
Y/P | 0.6995 | likely_pathogenic | 0.7497 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
Y/Q | 0.4819 | ambiguous | 0.5863 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
Y/R | 0.4096 | ambiguous | 0.5118 | ambiguous | 0.349 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
Y/S | 0.1636 | likely_benign | 0.2033 | benign | -0.562 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.3755564 | None | None | I |
Y/T | 0.3307 | likely_benign | 0.4032 | ambiguous | -0.476 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
Y/V | 0.3921 | ambiguous | 0.4544 | ambiguous | -0.432 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
Y/W | 0.5226 | ambiguous | 0.5606 | ambiguous | -0.423 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.