Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3279 | 10060;10061;10062 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
N2AB | 3279 | 10060;10061;10062 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
N2A | 3279 | 10060;10061;10062 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
N2B | 3233 | 9922;9923;9924 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
Novex-1 | 3233 | 9922;9923;9924 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
Novex-2 | 3233 | 9922;9923;9924 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
Novex-3 | 3279 | 10060;10061;10062 | chr2:178764680;178764679;178764678 | chr2:179629407;179629406;179629405 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.999 | D | 0.499 | 0.455 | 0.694693139321 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9496 | likely_pathogenic | 0.9725 | pathogenic | -1.746 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
L/C | 0.9658 | likely_pathogenic | 0.9829 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
L/D | 0.9988 | likely_pathogenic | 0.9994 | pathogenic | -1.458 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
L/E | 0.9891 | likely_pathogenic | 0.9951 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
L/F | 0.7692 | likely_pathogenic | 0.893 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | D | 0.652407507 | None | None | I |
L/G | 0.9927 | likely_pathogenic | 0.997 | pathogenic | -2.243 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
L/H | 0.969 | likely_pathogenic | 0.989 | pathogenic | -1.555 | Destabilizing | 1.0 | D | 0.778 | deleterious | D | 0.692577658 | None | None | I |
L/I | 0.2326 | likely_benign | 0.2677 | benign | -0.336 | Destabilizing | 0.999 | D | 0.487 | neutral | N | 0.514142107 | None | None | I |
L/K | 0.9788 | likely_pathogenic | 0.9904 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
L/M | 0.5012 | ambiguous | 0.6107 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
L/N | 0.9928 | likely_pathogenic | 0.9967 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
L/P | 0.9811 | likely_pathogenic | 0.9933 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.669631627 | None | None | I |
L/Q | 0.9382 | likely_pathogenic | 0.9775 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
L/R | 0.9506 | likely_pathogenic | 0.9794 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.646773929 | None | None | I |
L/S | 0.9886 | likely_pathogenic | 0.9954 | pathogenic | -2.066 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
L/T | 0.9605 | likely_pathogenic | 0.981 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
L/V | 0.3457 | ambiguous | 0.4233 | ambiguous | -0.784 | Destabilizing | 0.999 | D | 0.499 | neutral | D | 0.523340756 | None | None | I |
L/W | 0.9542 | likely_pathogenic | 0.9846 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/Y | 0.9689 | likely_pathogenic | 0.988 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.