Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32799 | 98620;98621;98622 | chr2:178539670;178539669;178539668 | chr2:179404397;179404396;179404395 |
N2AB | 31158 | 93697;93698;93699 | chr2:178539670;178539669;178539668 | chr2:179404397;179404396;179404395 |
N2A | 30231 | 90916;90917;90918 | chr2:178539670;178539669;178539668 | chr2:179404397;179404396;179404395 |
N2B | 23734 | 71425;71426;71427 | chr2:178539670;178539669;178539668 | chr2:179404397;179404396;179404395 |
Novex-1 | 23859 | 71800;71801;71802 | chr2:178539670;178539669;178539668 | chr2:179404397;179404396;179404395 |
Novex-2 | 23926 | 72001;72002;72003 | chr2:178539670;178539669;178539668 | chr2:179404397;179404396;179404395 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.988 | D | 0.802 | 0.524 | 0.82415279977 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5746 | likely_pathogenic | 0.4799 | ambiguous | -2.155 | Highly Destabilizing | 0.919 | D | 0.555 | neutral | D | 0.529785922 | None | None | N |
P/C | 0.8361 | likely_pathogenic | 0.7987 | pathogenic | -2.274 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/D | 0.9978 | likely_pathogenic | 0.9966 | pathogenic | -3.431 | Highly Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
P/E | 0.9921 | likely_pathogenic | 0.9886 | pathogenic | -3.214 | Highly Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | N |
P/F | 0.9935 | likely_pathogenic | 0.9906 | pathogenic | -1.139 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
P/G | 0.975 | likely_pathogenic | 0.9617 | pathogenic | -2.645 | Highly Destabilizing | 0.938 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/H | 0.9916 | likely_pathogenic | 0.9864 | pathogenic | -2.332 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/I | 0.7517 | likely_pathogenic | 0.7441 | pathogenic | -0.777 | Destabilizing | 0.995 | D | 0.837 | deleterious | None | None | None | None | N |
P/K | 0.9946 | likely_pathogenic | 0.9928 | pathogenic | -1.784 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/L | 0.7175 | likely_pathogenic | 0.6708 | pathogenic | -0.777 | Destabilizing | 0.988 | D | 0.802 | deleterious | D | 0.565994432 | None | None | N |
P/M | 0.924 | likely_pathogenic | 0.9059 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/N | 0.9951 | likely_pathogenic | 0.9926 | pathogenic | -2.283 | Highly Destabilizing | 0.991 | D | 0.78 | deleterious | None | None | None | None | N |
P/Q | 0.9824 | likely_pathogenic | 0.9736 | pathogenic | -2.115 | Highly Destabilizing | 0.988 | D | 0.805 | deleterious | D | 0.555234011 | None | None | N |
P/R | 0.9828 | likely_pathogenic | 0.9772 | pathogenic | -1.636 | Destabilizing | 0.988 | D | 0.809 | deleterious | D | 0.548650645 | None | None | N |
P/S | 0.945 | likely_pathogenic | 0.9138 | pathogenic | -2.759 | Highly Destabilizing | 0.414 | N | 0.311 | neutral | D | 0.543624216 | None | None | N |
P/T | 0.7806 | likely_pathogenic | 0.723 | pathogenic | -2.411 | Highly Destabilizing | 0.976 | D | 0.744 | deleterious | D | 0.554980521 | None | None | N |
P/V | 0.5447 | ambiguous | 0.5252 | ambiguous | -1.214 | Destabilizing | 0.991 | D | 0.768 | deleterious | None | None | None | None | N |
P/W | 0.999 | likely_pathogenic | 0.9985 | pathogenic | -1.679 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/Y | 0.9978 | likely_pathogenic | 0.9965 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.