Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32800 | 98623;98624;98625 | chr2:178539667;178539666;178539665 | chr2:179404394;179404393;179404392 |
N2AB | 31159 | 93700;93701;93702 | chr2:178539667;178539666;178539665 | chr2:179404394;179404393;179404392 |
N2A | 30232 | 90919;90920;90921 | chr2:178539667;178539666;178539665 | chr2:179404394;179404393;179404392 |
N2B | 23735 | 71428;71429;71430 | chr2:178539667;178539666;178539665 | chr2:179404394;179404393;179404392 |
Novex-1 | 23860 | 71803;71804;71805 | chr2:178539667;178539666;178539665 | chr2:179404394;179404393;179404392 |
Novex-2 | 23927 | 72004;72005;72006 | chr2:178539667;178539666;178539665 | chr2:179404394;179404393;179404392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.992 | N | 0.651 | 0.295 | 0.319686207203 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2271 | likely_benign | 0.2363 | benign | -0.752 | Destabilizing | 0.996 | D | 0.653 | neutral | N | 0.488358178 | None | None | N |
E/C | 0.8624 | likely_pathogenic | 0.8788 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/D | 0.4302 | ambiguous | 0.4118 | ambiguous | -1.025 | Destabilizing | 0.996 | D | 0.629 | neutral | N | 0.45965536 | None | None | N |
E/F | 0.8981 | likely_pathogenic | 0.9083 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/G | 0.3754 | ambiguous | 0.3706 | ambiguous | -1.107 | Destabilizing | 0.999 | D | 0.756 | deleterious | N | 0.484029793 | None | None | N |
E/H | 0.7438 | likely_pathogenic | 0.762 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/I | 0.4514 | ambiguous | 0.4934 | ambiguous | 0.212 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/K | 0.2674 | likely_benign | 0.2964 | benign | -0.531 | Destabilizing | 0.992 | D | 0.651 | neutral | N | 0.486934026 | None | None | N |
E/L | 0.5396 | ambiguous | 0.5778 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/M | 0.5791 | likely_pathogenic | 0.613 | pathogenic | 0.536 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
E/N | 0.6112 | likely_pathogenic | 0.6184 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/P | 0.9471 | likely_pathogenic | 0.9546 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/Q | 0.1853 | likely_benign | 0.1969 | benign | -0.877 | Destabilizing | 0.957 | D | 0.357 | neutral | N | 0.463846522 | None | None | N |
E/R | 0.3867 | ambiguous | 0.4235 | ambiguous | -0.237 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
E/S | 0.3432 | ambiguous | 0.3433 | ambiguous | -1.287 | Destabilizing | 0.997 | D | 0.651 | neutral | None | None | None | None | N |
E/T | 0.3481 | ambiguous | 0.3566 | ambiguous | -0.995 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/V | 0.2575 | likely_benign | 0.2815 | benign | -0.088 | Destabilizing | 0.999 | D | 0.763 | deleterious | N | 0.440084228 | None | None | N |
E/W | 0.9685 | likely_pathogenic | 0.9724 | pathogenic | 0.064 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/Y | 0.8465 | likely_pathogenic | 0.8614 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.