Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32803 | 98632;98633;98634 | chr2:178539658;178539657;178539656 | chr2:179404385;179404384;179404383 |
N2AB | 31162 | 93709;93710;93711 | chr2:178539658;178539657;178539656 | chr2:179404385;179404384;179404383 |
N2A | 30235 | 90928;90929;90930 | chr2:178539658;178539657;178539656 | chr2:179404385;179404384;179404383 |
N2B | 23738 | 71437;71438;71439 | chr2:178539658;178539657;178539656 | chr2:179404385;179404384;179404383 |
Novex-1 | 23863 | 71812;71813;71814 | chr2:178539658;178539657;178539656 | chr2:179404385;179404384;179404383 |
Novex-2 | 23930 | 72013;72014;72015 | chr2:178539658;178539657;178539656 | chr2:179404385;179404384;179404383 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.885 | 0.571 | 0.722748815689 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9163 | likely_pathogenic | 0.918 | pathogenic | -2.356 | Highly Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
L/C | 0.9481 | likely_pathogenic | 0.9391 | pathogenic | -1.631 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -2.348 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/E | 0.9905 | likely_pathogenic | 0.9908 | pathogenic | -2.117 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/F | 0.6286 | likely_pathogenic | 0.5922 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/G | 0.9895 | likely_pathogenic | 0.9899 | pathogenic | -2.91 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/H | 0.9869 | likely_pathogenic | 0.9851 | pathogenic | -2.361 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/I | 0.1801 | likely_benign | 0.1667 | benign | -0.76 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
L/K | 0.9838 | likely_pathogenic | 0.9838 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/M | 0.3233 | likely_benign | 0.3065 | benign | -0.795 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.486867644 | None | None | N |
L/N | 0.9938 | likely_pathogenic | 0.9931 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/P | 0.9407 | likely_pathogenic | 0.9322 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.490823346 | None | None | N |
L/Q | 0.9697 | likely_pathogenic | 0.9694 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.515860906 | None | None | N |
L/R | 0.9716 | likely_pathogenic | 0.9727 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.500883749 | None | None | N |
L/S | 0.9867 | likely_pathogenic | 0.9858 | pathogenic | -2.748 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/T | 0.9245 | likely_pathogenic | 0.9171 | pathogenic | -2.367 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/V | 0.2381 | likely_benign | 0.2187 | benign | -1.271 | Destabilizing | 0.999 | D | 0.66 | neutral | N | 0.441314458 | None | None | N |
L/W | 0.9217 | likely_pathogenic | 0.9209 | pathogenic | -1.635 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/Y | 0.9686 | likely_pathogenic | 0.9653 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.