Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32808 | 98647;98648;98649 | chr2:178539643;178539642;178539641 | chr2:179404370;179404369;179404368 |
N2AB | 31167 | 93724;93725;93726 | chr2:178539643;178539642;178539641 | chr2:179404370;179404369;179404368 |
N2A | 30240 | 90943;90944;90945 | chr2:178539643;178539642;178539641 | chr2:179404370;179404369;179404368 |
N2B | 23743 | 71452;71453;71454 | chr2:178539643;178539642;178539641 | chr2:179404370;179404369;179404368 |
Novex-1 | 23868 | 71827;71828;71829 | chr2:178539643;178539642;178539641 | chr2:179404370;179404369;179404368 |
Novex-2 | 23935 | 72028;72029;72030 | chr2:178539643;178539642;178539641 | chr2:179404370;179404369;179404368 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 1.0 | N | 0.761 | 0.454 | 0.772125089601 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/T | rs1388284089 | -1.588 | 1.0 | N | 0.678 | 0.477 | 0.681610798959 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.667 | likely_pathogenic | 0.6968 | pathogenic | -2.289 | Highly Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
I/C | 0.8095 | likely_pathogenic | 0.8198 | pathogenic | -1.982 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/D | 0.9299 | likely_pathogenic | 0.9429 | pathogenic | -2.932 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
I/E | 0.8275 | likely_pathogenic | 0.8639 | pathogenic | -2.848 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
I/F | 0.3587 | ambiguous | 0.366 | ambiguous | -1.593 | Destabilizing | 1.0 | D | 0.65 | neutral | N | 0.47329825 | None | None | N |
I/G | 0.9018 | likely_pathogenic | 0.9091 | pathogenic | -2.689 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
I/H | 0.7884 | likely_pathogenic | 0.817 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
I/K | 0.6077 | likely_pathogenic | 0.6584 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
I/L | 0.215 | likely_benign | 0.2118 | benign | -1.192 | Destabilizing | 0.993 | D | 0.215 | neutral | N | 0.471151789 | None | None | N |
I/M | 0.2106 | likely_benign | 0.2153 | benign | -1.195 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.480273236 | None | None | N |
I/N | 0.6188 | likely_pathogenic | 0.6462 | pathogenic | -1.942 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.487906558 | None | None | N |
I/P | 0.8834 | likely_pathogenic | 0.8938 | pathogenic | -1.534 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
I/Q | 0.6986 | likely_pathogenic | 0.744 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
I/R | 0.5277 | ambiguous | 0.5777 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
I/S | 0.6218 | likely_pathogenic | 0.6473 | pathogenic | -2.503 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.473018307 | None | None | N |
I/T | 0.4337 | ambiguous | 0.4642 | ambiguous | -2.3 | Highly Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.51271041 | None | None | N |
I/V | 0.1055 | likely_benign | 0.1058 | benign | -1.534 | Destabilizing | 0.993 | D | 0.235 | neutral | N | 0.409292466 | None | None | N |
I/W | 0.9158 | likely_pathogenic | 0.9297 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
I/Y | 0.74 | likely_pathogenic | 0.7611 | pathogenic | -1.598 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.